Gene Information

Name : O5Y_20355 (O5Y_20355)
Accession : YP_008454617.1
Strain : Rhodococcus erythropolis CCM2595
Genome accession: NC_022115
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4498927 - 4499976 bp
Length : 1050 bp
Strand : -
Note : COG4779 ABC-type enterobactin transport system, permease component

DNA sequence :
GTGAGCATCGATTTCGGGCGCCCCACCACGGTGGTGCGCTCACCCAAAGAAGGCTGGTCCGCGCGGATCGACGTCCGCAC
GGTCACGGTCTGCCTCATCCTCGTTGCGCTTGCACTGGCGATCGGTGTCATCGCCCTCGGTAGTGGTGACTACCAGGTGC
CGATCGGGGACGTCCTCGGCGCACTGTTCGGCGAAGCGCCCGCGCGTATCCACATGGTCGTCGTGGAATGGCGTCTGCCC
CGAGTTCTGTTGGCGCTGATGCTCGGTGCGGCACTCGGCATGAGCGGTGCGATCTTCCAATCGCTCACCAGGAACCCGTT
GGGTAGCCCAGACATCATCGGCTTCAACTCCGGTGCGTACACGGGCGCTCTTGTGGTCATCCTCCTCATCGGTGGTACTT
ACTACGAGATCGCAGTCGGTGCTCTGGTGGGCGGAATCGCGACCGCAGCAGTGGTTTACCTCCTTGCGTACAAGCGTGGT
GTGCAGGGATTCCGGTTGATCATCGTCGGTATCGCCATCAGTGCGATGTTGGGCTCGGTCAACACCTGGATGATTCTCAA
GGCGAAACTTGACGACGCCATGGCCGCGGCAGTGTGGGGTGCCGGTTCGTTGAACGGTCTCGGCTGGACTCAGGTGTGGC
CGGTGGTCGTCGTGCTGGCCATCCTCGTTCCGCTGATCCTGGTGTTGGGCAGGCGGATGCAGATGCTCGAGATGGGCGAC
GACGCCGCCAAGGCGCTCGGAGTCCGGGCCGAACCCACGCGGCTTTCCCTGGTTGTTCTGGGTGTCGCTCTGACGGCCAT
GGTGACAGCAGCGGCCGGACCGATCGGGTTCGTCTCGCTGGCGGCTCCGCAATTGGTGAGGCGATTGACCGGTAGTGCCG
GAGTGACCCTGCTGCCGTCGGCAGCAATGGGTGGCGCGTTGTTGATGGTCAGCGACTGGGTGGCGCAGCGAGCTTTTGCA
CCGACACAGTTGCCGGTCGGCGTCGTCACCGTCTCCATCGGTGGCATCTATTTTGTATGGCTTCTCGCGCGAGAGGCCCG
TAAGCAGTGA

Protein sequence :
MSIDFGRPTTVVRSPKEGWSARIDVRTVTVCLILVALALAIGVIALGSGDYQVPIGDVLGALFGEAPARIHMVVVEWRLP
RVLLALMLGAALGMSGAIFQSLTRNPLGSPDIIGFNSGAYTGALVVILLIGGTYYEIAVGALVGGIATAAVVYLLAYKRG
VQGFRLIIVGIAISAMLGSVNTWMILKAKLDDAMAAAVWGAGSLNGLGWTQVWPVVVVLAILVPLILVLGRRMQMLEMGD
DAAKALGVRAEPTRLSLVVLGVALTAMVTAAAGPIGFVSLAAPQLVRRLTGSAGVTLLPSAAMGGALLMVSDWVAQRAFA
PTQLPVGVVTVSIGGIYFVWLLAREARKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 3e-50 50
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-50 50
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 2e-50 50
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-50 50
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_20355 YP_008454617.1 ABC transporter permease VFG0928 Protein 1e-49 53