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Name : O5Y_20320 (O5Y_20320) Accession : YP_008454610.1 Strain : Rhodococcus erythropolis CCM2595 Genome accession: NC_022115 Putative virulence/resistance : Unknown Product : iron-siderophore ABC transporter permease/ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 4491081 - 4492946 bp Length : 1866 bp Strand : - Note : COG1132 ABC-type multidrug transport system, ATPase and permease components DNA sequence : ATGACGACGACACAGGCCACGAAAGCAGACATTTCATCTGAAGAGGCCGACGTATCACAAGGAGCGGCGGCCGAAGCCTC GCAAGCCAAAGCTGAAGCGGCGGAGCACAAGAGCGCGCTTCGCGAACTCCTTGCTCCAGTGCGCACGCGGACCACCATCG CGATGGTGATGCAGGTGATCGCCGCGGTCGCCGCCATCGTGCCGTACGTGGCCATCGCCGAACTGGGTAAGACGCTGATC GTGGGCGGTGACGTCGACTCGTCCCGTGTCTGGACGATCGTGTGGGTGGTCGTCTTCGGTCTGGGTATGCGTGCGTTCTT CGGAGGCGGTGCGTTGATCGTGACGCACTTCGCCGATGTGAATCTGCAGGCGGTGCTGCGGCGTCGAATCGCAGTGACTC TCGGTCGACTTCCCCTGGGCTGGTTCACCTCCCACTCGTCCGGAACCGTGCGCAAAGCCGCGCAGAACGACATCTCCGAT CTCCATTACCTGGTTGCGCACAGCGCCGTCGAGACCACCGGAGCCATCGCAGTGCCGCTCGTCGGACTCGGCTACGTGAT CTCGATCGACTGGCGTCTGGGATTGGTCGCGATTGCCACGCTCCCGATCTACATGATCGCCTACGCGACGATGACCAAGG ACATGGCCGTCAAGATGAGCCGGATGAATGAGGGCATCGCGGCCATCAGCAACACCATCGTCGAGTTCGTCACCGGTATC GCAGTGGTCAAGACCTTCGGTCAGGACAAGCAGACACACTCCCGGTACCGCGACGCCGCCAAGGCATTTGCACTCTCGTA CGAGGGCTGGGTTCGCCCGATGCTCCGGACCGAGGCGCTGGCCTCGATTGCATTGAGCGCACCGGTAGTGCTGGTGGTCA ACCTTGGCCTCGGCTCGTGGTTCGTCCACTCCGGATGGGTGTCACCCATCGATGTGCTGACCAGTTCTCTTGTCGCGATG GTGATTCCGGTGTCGGTGACGACCATCGGTTTCGGTATGCAGGCTCGCCGAGAGGCAGCCGCCGCTGCGGCGCGACTGAT TGCGCTGTTCTCGACCGAGGCGCTGCCGGAAACCGATCATCCGAAAAGTCCCGTGGGGAACGAAGTTCGATTCTCCGGAG TTTCTTTCGCCTACGACGACGGCGCCGACGTTCTGACCGACATCGATCTGACGCTGCCGGAGGGCACGGTGACGGCGTTG GTCGGACCTTCGGGTTCGGGTAAGTCGACGCTGGCAACGCTGGTTCCGAGGTTCCACGACGTGCGTGCCGGATCCGTGGC CATCGGTGGTGCCGACGTCAGGGACGTGGCGACCGACGAGCTGTACCGCCACGTCGGATTCGTTCTGCAGGACGTGCAGC TGGTCGAAGCGACCGTGCTCGACAACATTCGGCTTGCCCGACCGCAGGCGACTTTGGCCGAGGTGAAGGCCGCTGCCGCA GCCGCGCAGATCGACACCCGAATCGAAGCGCTCCCGAGAGGCTACGACTCCGTAGTCGGGGTCGACGCCAGATTCTCGGG TGGTGAAGCCCAAAGAGTCTCCATAGCGCGTGCGATTCTCGCGGACACTCCTGTTCTCGTGCTCGACGAAGCAACCGCTT TCGCCGATCCGGAGTCCGAAGCCGATATCCAGGAGGCGTTGTCGCGCTTGACGGTCGGCCGCACCGTGCTGGTGATCGCG CACCGGTTGGCATCGATCGTGAGCGCCGATCAGATCGTGGTCCTCGACGCCGGACGGATCGTGGAGAAGGGCACGCACGA TCAGCTTGTGGCGAGTGGTTCAACCTATGCCCGGATGTGGGCGAGTCACAGTCGGGCCGACAGCATCGCTGGTATGTCTG ACGCAGCAGGAAAGGCCAACTCATGA Protein sequence : MTTTQATKADISSEEADVSQGAAAEASQAKAEAAEHKSALRELLAPVRTRTTIAMVMQVIAAVAAIVPYVAIAELGKTLI VGGDVDSSRVWTIVWVVVFGLGMRAFFGGGALIVTHFADVNLQAVLRRRIAVTLGRLPLGWFTSHSSGTVRKAAQNDISD LHYLVAHSAVETTGAIAVPLVGLGYVISIDWRLGLVAIATLPIYMIAYATMTKDMAVKMSRMNEGIAAISNTIVEFVTGI AVVKTFGQDKQTHSRYRDAAKAFALSYEGWVRPMLRTEALASIALSAPVVLVVNLGLGSWFVHSGWVSPIDVLTSSLVAM VIPVSVTTIGFGMQARREAAAAAARLIALFSTEALPETDHPKSPVGNEVRFSGVSFAYDDGADVLTDIDLTLPEGTVTAL VGPSGSGKSTLATLVPRFHDVRAGSVAIGGADVRDVATDELYRHVGFVLQDVQLVEATVLDNIRLARPQATLAEVKAAAA AAQIDTRIEALPRGYDSVVGVDARFSGGEAQRVSIARAILADTPVLVLDEATAFADPESEADIQEALSRLTVGRTVLVIA HRLASIVSADQIVVLDAGRIVEKGTHDQLVASGSTYARMWASHSRADSIAGMSDAAGKANS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDPW8_2175 | YP_005143723.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 9e-98 | 47 |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 2e-89 | 42 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 2e-89 | 42 |
