Gene Information

Name : O5Y_18910 (O5Y_18910)
Accession : YP_008454334.1
Strain : Rhodococcus erythropolis CCM2595
Genome accession: NC_022115
Putative virulence/resistance : Unknown
Product : oligopeptide/dipeptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4174972 - 4176672 bp
Length : 1701 bp
Strand : -
Note : COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase

DNA sequence :
ATGAATGCAACACCCGCACAGGCAGTTCTCGCCATCCGGGATCTGGTGATCGAGTTCGATGCCGACGATTCCCGTGGCTC
GTCGACAACTGTGGTCGACCACGTCAACCTCGAATTGGGTTTCGGTGAGATATTGGCGTTGGTCGGCGAGTCCGGATCCG
GTAAGTCGTTGACCGCACGCGCTGTTCTCGGGTTGTTACCGGACGGCGCGCAGGCCCGCGGGTTGATCCAACTCTGTGGC
CAGCAGGTGCTCGGTGCCGACGAGGCGACGCTCAATCAATTGCGGGGGACTCGGGCCGCGATGGTTTTCCAGGAGCCTCA
GACTGCACTGAATCCAGTGCAGAAGGTGGGTTGGCAGATCGCGCAGGCGCTGCGGGCACACGGCAAGATCTCGCGTGCCG
ACGCCAGAGTTCGCGCAATCGATCTTCTACGGATGGTGGAGATTCCGGAACCGGAGCGTCGGGTCGACTGGTATCCGCAT
CAACTCTCGGGTGGACAGAAGCAGCGGGTTGTCATCGCGCTGGCGTTGTCGGGTTCTCCTGATTTACTCATCGCCGACGA
ACCGACTACTGCGCTCGACGTCACCGTGCAGGCCGAGATTCTGCAACTCCTGCGTAATCTGCGTGATCGTTCGGGCACTG
CAATACTGCTCATCACACACAACATGGGTGTCGTTGCGGACATCGCAGATCGCGTGCTGGTGATGCGATCGGGAAGGGTC
GTCGAGCAGCAGTCCGTTTTCGATCTCTTTGCGACGCCGCGTGAGTCGTACACACAGGCGTTGCTTGCGGCCGTGCCACG
TCTGCCGGAGGCCGACCAGCCGAAGCCTGTGGTTGCTCTGATCGATAGCGAAGGCGACGCGCAAGTCCCGCCGATCCTGC
GGTTCGACGCGGCCTCCATCGTGTACCCGGCGAGGCTGGGCAACAAAGAGTTTCGTGCGGTCGATCAGGTGAGCCTGGCG
GTTCAGGCCGGCGAGGTTGTCGGACTGGTCGGTGAATCGGGATCAGGGAAGACAACTCTCGGCCGGGCCGCGCTCGGTGT
TATCAGGGCCAGTAGCGGCATCGTTGCTTTCGACGGAACCGATCTCGGAAAGATCTCCGCCGCGAATCTTCGGGGCCTCC
GCAAGGGAATGGCCTTGATTCATCAGGACCCTGCGGCATCTCTCGATCCGCGTCGGACGGTCGGACAAAGCGTCGGCGAG
CCACTCGAAGTCCATCGCTTTGCCACCGGAGCCCTGCTGCGAAACCGGGTGGGGGAGTTACTCGAATCAGTTCGCCTACC
GAAGTCTTTTGCTCACCGGGCACCAGGAGAACTTTCCGGTGGTCAACGCCAGCGTGTTGCGCTGGCCCGAGCACTTGCCC
TCGGACCGAGACTGCTGGTGGCCGATGAGCCGACCAGCGCTCTGGATGTTTCCGTCCAAGCCGATGTTCTTTCACTTTTT
GCCGATCTCAGGGAGGAATACAACTTCGCATGTCTGTTCATCAGCCACGATCTTGCAGTCGTCAATCAGGTAGCCGACCG
GGTAGCGGTACTGCGCAGCGGGGAGTTGGTCGAAGAGGGCCCCGCTGCAGAGGTATTCAGCTCGCCACGGCAGGACTACA
CACAACAGTTGGTTGCCGCGGTGCCTGTTCCAGATCCGCGTCGTCAGCGCGCCGGGCGGGAACGGGAATCACTGGTTCCC
GACCTGACTGTTGCCGTTTGA

Protein sequence :
MNATPAQAVLAIRDLVIEFDADDSRGSSTTVVDHVNLELGFGEILALVGESGSGKSLTARAVLGLLPDGAQARGLIQLCG
QQVLGADEATLNQLRGTRAAMVFQEPQTALNPVQKVGWQIAQALRAHGKISRADARVRAIDLLRMVEIPEPERRVDWYPH
QLSGGQKQRVVIALALSGSPDLLIADEPTTALDVTVQAEILQLLRNLRDRSGTAILLITHNMGVVADIADRVLVMRSGRV
VEQQSVFDLFATPRESYTQALLAAVPRLPEADQPKPVVALIDSEGDAQVPPILRFDAASIVYPARLGNKEFRAVDQVSLA
VQAGEVVGLVGESGSGKTTLGRAALGVIRASSGIVAFDGTDLGKISAANLRGLRKGMALIHQDPAASLDPRRTVGQSVGE
PLEVHRFATGALLRNRVGELLESVRLPKSFAHRAPGELSGGQRQRVALARALALGPRLLVADEPTSALDVSVQADVLSLF
ADLREEYNFACLFISHDLAVVNQVADRVAVLRSGELVEEGPAAEVFSSPRQDYTQQLVAAVPVPDPRRQRAGRERESLVP
DLTVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-65 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-65 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-65 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-65 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-79 41