Gene Information

Name : xerD (O5Y_15015)
Accession : YP_008453576.1
Strain : Rhodococcus erythropolis CCM2595
Genome accession: NC_022115
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3255417 - 3256340 bp
Length : 924 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
GTGCTTGCCCGACAGGTGGACTCGTATCTCGACCATCTAGCGGTCGAGCGAGGATCTGCGCGCAACACTCTGCTTTCGTA
TCGCCGCGACCTGAATCGGTATGCGGAGTACCTGAACGGGCGCGGCATCGACGACGTCGCGGGCGTGACGGAAAACGACG
TCACCGAATTCGTGACTCATCTGCGCCTGGGTGACAAAGATGCCGGCGTCGTACCGTTGGCCGCCAGTTCGGCAGCGAGG
ACCCTGATCGCGGTCCGCGGATTCCACAAGTTCTCCGCCGCCGAGGGCCTGGTCGGTGTCGATGTGGCTCGAACGGTCAA
GCCGCCGACGCCCGGACGCAAGCTGCCCAAGGCTCTGCCGCTCGACGACGTGATCGCCCTACTCGACGCTTCGGGTGGCG
GTGCGGCCGGTGACGGGCCCCGCGACCTGAGGGATCGCGCTCTCTTAGAGCTTCTGTACTCGACCGGAGCACGCATCACC
GAGGCGATCGATCTGGACGTCGACGACATCGACACCGAAACCCGTTCCGTGCTGCTCAAGGGCAAGGGCGGCAAGCAGCG
GATCGTCCCCGTCGGCAGGCCGGCGATCGCCGCCGTCGACGCGTATCTCGTCCGCGGGCGCCCCAGCCTCGCGACGCGTG
GTGTTCCTGCCCTCTTTCTCAACGCTCGCGGGGGACGCCTCTCGCGTCAGAGTGCATGGCAGATTCTTCAGGACGCGGCC
GCGTCGGCCGGGATCAAGGCGGACGTCTCACCCCATACGCTCAGGCACTCGTTTGCCACCCACCTGCTCGACGGCGGCGC
GGACGTACGCGTCGTGCAGGAACTTCTCGGTCACGCTTCGGTAACCACGACGCAGATCTACACACTGGTCACCGTCACAG
CGCTGCGCGAAGTGTGGGCTCAGGCACACCCACGCGCCCGTTAG

Protein sequence :
MLARQVDSYLDHLAVERGSARNTLLSYRRDLNRYAEYLNGRGIDDVAGVTENDVTEFVTHLRLGDKDAGVVPLAASSAAR
TLIAVRGFHKFSAAEGLVGVDVARTVKPPTPGRKLPKALPLDDVIALLDASGGGAAGDGPRDLRDRALLELLYSTGARIT
EAIDLDVDDIDTETRSVLLKGKGGKQRIVPVGRPAIAAVDAYLVRGRPSLATRGVPALFLNARGGRLSRQSAWQILQDAA
ASAGIKADVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVTALREVWAQAHPRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-26 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-26 41