Gene Information

Name : smpB (O5Y_10795)
Accession : YP_008452746.1
Strain : Rhodococcus erythropolis CCM2595
Genome accession: NC_022115
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2329133 - 2329606 bp
Length : 474 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
GTGAAGGAAAAGGGCCGCAAGGTCATTGCGACCAATCGCAAAGCACGCCACAACTACACGATCATCGACACCTACGAGGC
CGGTATCGCGCTCGTCGGGACCGAGGTCAAGAGTCTGCGTGAAGGCAAGGCGTCGCTCGTCGATGCGTTCGCCACCGTGG
ACAACGGCGAAGTGTGGTTGCGCTCGTTGCACATTCCGGAGTACACGCAAGGCACGTGGAACAACCACTCTCCGCGCCGC
ACCCGAAAGCTCCTGCTGCACAAGCGTGAGATCGAGCACCTCGTCGGCAAGACCCGCGAGGGAAACCAGACACTGGTTCC
GCTCTCGATGTACTTCAACGACGGCAAGGTCAAGGTCGAACTCGCGCTGGCAAAGGGTAAGCAGGACTACGACAAGCGCC
AGGACATGGCCAAGCGGACCGCCGAGCGCGAGGTGACCCGCGAGCTCGGTCGTCGTATCAAGGGCATGCGCTGA

Protein sequence :
MKEKGRKVIATNRKARHNYTIIDTYEAGIALVGTEVKSLREGKASLVDAFATVDNGEVWLRSLHIPEYTQGTWNNHSPRR
TRKLLLHKREIEHLVGKTREGNQTLVPLSMYFNDGKVKVELALAKGKQDYDKRQDMAKRTAEREVTRELGRRIKGMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-54 72
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 6e-33 52