Gene Information

Name : SAAG_01239 (SAAG_01239)
Accession : YP_008448745.1
Strain : Staphylococcus aureus 55/2053
Genome accession: NC_022113
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 778770 - 779990 bp
Length : 1221 bp
Strand : -
Note : -

DNA sequence :
ATGTGGTACGAGAAATTTACTAATAAACATGGTGAAACTAAATATCGCTATTATGAGAAGTACAAAGACCCTCTCACAAA
TAAATGGCGACGTGTTAGCGTGGTTCTCAATAAGAATGGTAAGCAGTCGCAGAAAGAGGCTCAGAGACGCTTAAATGAGC
GTATAGAGGCAAAACTGAATGATAATACACCGACAACGTTAAAATCATTAACTTTTCATGTCGCATGTGATGAGTGGTTT
CAGAATTATATCAAAACGTCTGGGTCAAAAAGAACAACTATTAAAACTAAATTGAGTAAGCTAAACACTTTGAAGAAATT
TGTAGATGAAGATATTTTAATCAATAAAATAACACTTTCATATGCACAACAAGTTTTCGATGAAATGGATAGTAAAGGTT
ATGTATATCAAGTAAACAAAGATGCGTTAAGCATATTCAAAAATGTATTTGAATACACTAGACGCATCTACAAACTGCAA
GATTTAGAATTTTTAAAAGATATAACGTTAAATAAAAGGATTAAGTCTTATGATGAAGTGAAAGCTAAACGTAATAAATA
CCTCGAATTAAATGAAATACAATCTATCATCAAAGATATTAATATGAAGGCTCAGAAGATGCACTCAGGTATCCATAAGC
GGTTTTATTTATTCGTTGCACTCATGACAGAATTCCAAGCCTTAAATGGTATGCGTATTGGTGAAATGTTAGCCATTAAA
AATGAAGATATAGACTTTGATAATAAGAGTTTAAATATTAACGGAACCATCCATTGGTTTCACGATGAATCTGGTGGATT
CGGTGTAAAAGATACCACTAAAACAGAGTCTAGTTATAGAACAATTGGATTGAGTAGCAGAAGTTGCGAGATATTAAAGA
AAGCAATACTGGAGAACAAAAAGGATTCAAAATGGAATGATGGATATCTAAATAGAAATTTTGTATTTACTAATCATAAA
GGCAACCCAATGCAGACTGAAAGATTCAATAAAATCCTTAGGGAATCAGCTAAAGATGTGGGTATTGAAAAAGAAATTTC
TTCACATATATTAAGACATAGCCACATATCATTACTCTCTCAACAAGGAGTGTCACTTAAAGCTATTATGGATCGTGTAG
GCCATTCCGACCACCGTACAACACTTTCTATTTATTCACACGTTACTGAACAGATGGATAAGGATATGATGAACAAACTT
GAACAGGTAAAGCTTGGATAA

Protein sequence :
MWYEKFTNKHGETKYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQRRLNERIEAKLNDNTPTTLKSLTFHVACDEWF
QNYIKTSGSKRTTIKTKLSKLNTLKKFVDEDILINKITLSYAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQ
DLEFLKDITLNKRIKSYDEVKAKRNKYLELNEIQSIIKDINMKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEMLAIK
NEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNHK
GNPMQTERFNKILRESAKDVGIEKEISSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKL
EQVKLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAAV_0787 YP_003281710.1 pathogenicity island protein, integrase Virulence SaPIAv Protein 1e-169 99
int AAC28969.1 integrase Not tested SaPI1 Protein 4e-167 97
int YP_493499.1 integrase Not tested SaPI5 Protein 4e-166 97
SACOL0885 YP_185756.1 pathogenicity island protein, integrase Not tested vSa1 Protein 8e-167 97
int AAL04148.1 integrase-like protein Not tested SaPI3 Protein 6e-167 97
SAUSA300_1438 YP_494135.1 phiSLT ORF401-like protein, integrase Not tested ¥ÕSa2 Protein 1e-71 47
int NP_646259.1 integrase Not tested ¥ÕSa2 Protein 2e-72 47
SAR0366 YP_039823.1 integrase Not tested SaPI4 Protein 1e-74 47
SAOV_0274 YP_005735791.1 putative prophage integrase Not tested ¥ÕSa1 Protein 8e-72 46