Gene Information

Name : LBPG_00163 (LBPG_00163)
Accession : YP_008446194.1
Strain : Lactobacillus paracasei 8700:2
Genome accession: NC_022112
Putative virulence/resistance : Virulence
Product : helix-turn-helix domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 959260 - 959448 bp
Length : 189 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAATAATATCCATGCACTCAGAACGCACCAACAATTGACTCAACAGGAACTGGCTGATGCGGTGAATGTAACCCG
CCAAACGATTAATGCCATCGAGAATAATAAATACGATCCAACGCTTTCTTTAGCTTTCGCACTTGCAGAACGCTTAGAGA
CGACTGTGGATCAACTGTTTCAACATTAG

Protein sequence :
MENNIHALRTHQQLTQQELADAVNVTRQTINAIENNKYDPTLSLAFALAERLETTVDQLFQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-12 57
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-08 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-08 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBPG_00163 YP_008446194.1 helix-turn-helix domain-containing protein VFG2175 Protein 2e-08 45
LBPG_00163 YP_008446194.1 helix-turn-helix domain-containing protein VFG2168 Protein 2e-08 45