Gene Information

Name : LBPG_00123 (LBPG_00123)
Accession : YP_008446158.1
Strain : Lactobacillus paracasei 8700:2
Genome accession: NC_022112
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 913072 - 913737 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
GTGGCCATTTTGACAGCACGACAACTGACGAAGCAATATGCAGGGGAAAGTCGACCAGCGTTAGATCACGCTGATTTTAG
TATTGAAAAAGGTGAATTTGTGGCAATCGTTGGGCCGAGTGGTTCGGGTAAGTCAACCTTGCTACATCTGCTGGGCGGTA
TTGATCAACCAACCAGTGGTCGGGTACAGCTATACGATACAGATATTTATGCGTTGAATCAGACGCAATTAGCCATTTTT
CGGCGGCGACAAGTCGGGTTGATTTATCAATTCTATAATCTGATTCCCGATTTGACAGTGGTCGAGAACATGACGCTGCC
CGCTGACTTGGACGGTCGAACCGTCGCGACATCTGAGTTGACAGAATTACTGGCTACTTTGGGTCTGACGGAAAAGCAAG
ATGCTTTGCCAAATCAACTGTCAGGCGGCCAACAGCAGCGCGTTGCGATTGGCCGGGCACTGATGAATCATCCGGCCATT
ATTTTAGCCGATGAACCAACGGGCAACTTGGACCGCCGTAATTCACAAGACATCATGACCTTATTGCGACAGGCGAATAT
CAAGCAAGGTCAGACTTTAATTGTGATTACGCATGATCCCGATATTGCTAAGCAAGCAGATCGCGTTGTGACCATCAATG
ACGGTGTGCTACGCGAAGGGCGGTGA

Protein sequence : 
MAILTARQLTKQYAGESRPALDHADFSIEKGEFVAIVGPSGSGKSTLLHLLGGIDQPTSGRVQLYDTDIYALNQTQLAIF
RRRQVGLIYQFYNLIPDLTVVENMTLPADLDGRTVATSELTELLATLGLTEKQDALPNQLSGGQQQRVAIGRALMNHPAI
ILADEPTGNLDRRNSQDIMTLLRQANIKQGQTLIVITHDPDIAKQADRVVTINDGVLREGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-31 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBPG_00123 YP_008446158.1 ABC-type antimicrobial peptide transport system CP001581.1.gene598.p Protein 8e-48 53
LBPG_00123 YP_008446158.1 ABC-type antimicrobial peptide transport system CP001581.1.gene798.p Protein 2e-46 50
LBPG_00123 YP_008446158.1 ABC-type antimicrobial peptide transport system NC_008702.1.4606598. Protein 5e-30 46
LBPG_00123 YP_008446158.1 ABC-type antimicrobial peptide transport system NC_012469.1.7686878. Protein 6e-32 42