Gene Information

Name : LBPG_02334 (LBPG_02334)
Accession : YP_008447561.1
Strain : Lactobacillus paracasei 8700:2
Genome accession: NC_022112
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2409038 - 2409922 bp
Length : 885 bp
Strand : -
Note : -

DNA sequence : 
ATGGAATTCTTTACCGCTTTGGGAAAATATGATTTCCTGCAAAGCGCGTTGATCACCGCCATCATGGTTGGTATCATGTC
AGGCTTGATCGGAAGTTTCATCATTTTACGCGGCATGTCGCTGATGGGGGATGCGATTTCCCATGCGGTCCTGCCCGGGG
TAGCCGTTGCTTATATGCTCGGTATTAACGTCATGATCGGGGCATCGGTTTTCGGAATTATTGCGGCTTTGCTGATCGGG
TTTGTGGCAGCCAACAGTAAAATCAAAACCGACACATCTATCGGGGTCGTGTTCAGTGCGTTCTATGCCTTGGGTTTCAT
TCTGATTTCAATGGCTGAAAGTGCGACCAACTTGCACCATATTCTGTTCGGTAACATTTTAGCCGTCAGCGACAGCGACA
TTGTCACCACCGCTGTCGTGTTGGGAATTGTGATCCTGTTCGTGGTTCTGTTCTATAAGGAACTGCTGATCACCTCGTTT
GATAATACGTTTGCGAAAACGTATGGCTTGAATACCACCATGATTCACTATGCTTTGATGCTGGTGTTGACGCTTGTCAC
CGTTTCAGCCTTGCAGACAGTTGGGATCATTCTAGTTGTGGCGATGCTGATTACGCCAGCAGCAACTGCCTTCTTGTGGA
CGGATCGGTTAGAAACGACGCTGATCACGTCCGCTAGCGTAGGCGTTTTCTCGGCCATCACCGGACTTTACTTCAGTTTC
ACCTTTAACTGGGCATCCGGGCCGGCCATTGTGCTCGTAGCTGCGGTCCTGTTCGCCATTTCCTTCGTCTTCTCACCGAA
GCAGGCGTTCTTCAGTTTCAGTAAAAAACAACGAGAAAAGAAAACCGCTGCTGCTACCCACACTGCCGAGGAGGCTGTTC
GATGA

Protein sequence : 
MEFFTALGKYDFLQSALITAIMVGIMSGLIGSFIILRGMSLMGDAISHAVLPGVAVAYMLGINVMIGASVFGIIAALLIG
FVAANSKIKTDTSIGVVFSAFYALGFILISMAESATNLHHILFGNILAVSDSDIVTTAVVLGIVILFVVLFYKELLITSF
DNTFAKTYGLNTTMIHYALMLVLTLVTVSALQTVGIILVVAMLITPAATAFLWTDRLETTLITSASVGVFSAITGLYFSF
TFNWASGPAIVLVAAVLFAISFVFSPKQAFFSFSKKQREKKTAAATHTAEEAVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 1e-56 59
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 2e-56 59
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-40 43
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-40 43
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-40 43
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-40 43
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBPG_02334 YP_008447561.1 hypothetical protein BAC0352 Protein 9e-41 43
LBPG_02334 YP_008447561.1 hypothetical protein BAC0442 Protein 7e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBPG_02334 YP_008447561.1 hypothetical protein VFG0528 Protein 8e-41 43