Gene Information

Name : LBPG_00411 (LBPG_00411)
Accession : YP_008446639.1
Strain : Lactobacillus paracasei 8700:2
Genome accession: NC_022112
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1414088 - 1414858 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence :
ATGTCAACATTACTTAAATTAAAAAATATCGAAAAAACTTATACCAGTCGCGGGGCTCAGCCGGTGCGTGCCTTGACGAA
CATCAGTTTCACTGTTGAAGCCGGTGAATTTGTGGCAATTATGGGTGAATCAGGTTCTGGTAAAAGCACCTTGCTAAATC
TGATTGCAACGCTGGACGATCCAACCGGCGGCGATATTAGTCTAAACGGACAGGATCTGAGCAACGTCAAGGAAGGCGCC
CGGGCTAAATTTCGCCGAGAACACCTCGGTTTCATCTTTCAGGATTTCGACTTGCTTGACACCTTCAATGTTCAAGACAA
CATCTTTCTCCCATTAGTCCTTGCCAAGAAGCCTCTCGAAATTATGAGAAATCGGCTAACTAAGCTCGCTCCACAACTAG
GCATCGATGCCTTGCTGAAAAAATATCCTTACGAGCTTTCCGGCGGCCAGCAACAGCGCGTGGCGGCAGCACGCGCGATG
ATCACCGAGCCAGAAATTTTGTTGGCTGATGAACCCACTGGCGCGTTGGATTCCAAAACTTCTACAGAACTGCTTGATCT
GCTCACAGATGTGAATGCCGAAAACCGGCAAACGATCCTCATGGTAACGCACAGTGCTGTGGCGGCCAGTCACAGCCGAC
GAGTATTATTTATTCGCGACGGTCAAATTTTTCATCAACTTTATCGTGGGGATCTCGATCAACCAGCCTTTCTAACCCGT
ATCAGCGAGACGATGACCGCCATGCTGACAAAGGCAGGCGATGGACAATGA

Protein sequence :
MSTLLKLKNIEKTYTSRGAQPVRALTNISFTVEAGEFVAIMGESGSGKSTLLNLIATLDDPTGGDISLNGQDLSNVKEGA
RAKFRREHLGFIFQDFDLLDTFNVQDNIFLPLVLAKKPLEIMRNRLTKLAPQLGIDALLKKYPYELSGGQQQRVAAARAM
ITEPEILLADEPTGALDSKTSTELLDLLTDVNAENRQTILMVTHSAVAASHSRRVLFIRDGQIFHQLYRGDLDQPAFLTR
ISETMTAMLTKAGDGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBPG_00411 YP_008446639.1 ABC transporter NC_012469.1.7686878. Protein 1e-34 48
LBPG_00411 YP_008446639.1 ABC transporter CP001581.1.gene798.p Protein 5e-36 47
LBPG_00411 YP_008446639.1 ABC transporter CP001581.1.gene598.p Protein 7e-35 44
LBPG_00411 YP_008446639.1 ABC transporter NC_008702.1.4606598. Protein 1e-30 43