Gene Information

Name : O170_01540 (O170_01540)
Accession : YP_008439645.1
Strain : Chlamydia trachomatis F/2-93
Genome accession: NC_022106
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 318075 - 320639 bp
Length : 2565 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTTTGAGAAGTTTACCAATCGCGCAAAGCAAGTGATTAAGTTGGCGAAAAAAGAGGCTCAACGACTCAATCACAACTA
TCTAGGAACCGAGCACATCTTGTTAGGATTACTAAAATTAGGCCAGGGTGTGGCTGTTAATGTATTACGCACTCTTGGTG
TTGACTTCGATACAGCAAAGCACGAAGTAGAAAGGCTGATTGGCTATGGCCCCGAGATTCAAGTTTACGGAGATCCAGCT
CTTACTGGAAGAGTGAAGAAATCTTTTGAATCCGCTAATGAAGAAGCTGCTCTTTTAGAACACAATTATGTTGGAACTGA
ACATCTTTTGTTAGGTATTCTCAATCAATCCGATGGAGTGGCTTTGCAAGTATTAGAAAATTTGCACGTGGATCCTAAAG
AAATCCGAAAAGAGATTTTAAAAGAATTAGAAACATTTAATTTACAACTCCCCCCCTCTTCCTCCATCACTCCTAGAAAT
ACTAATAGCTCTTCTTCTTCGAAATCTTCTTCTCCTTTAGGAGGTCATACTTTAGGCGGAGATAAACCTGAAAAACTTTC
AGCTTTGAAGGCGTACGGTTACGACTTAACAGAAATGTTTAAAGAATCGCGCCTCGATCCAGTGATCGGGCGTTCTGCAG
AAGTCGAACGATTAATTTTAATTCTTTGTCGTCGAAGAAAAAATAACCCAGTCTTAGTTGGAGAAGCTGGAGTAGGGAAA
ACAGCCATTGTAGAAGGCCTCGCTCAGAAAATTGTCTCAGGAGAAGTTCCTGAAGCTCTTCGTAAAAAACGCTTGATCAC
TTTAGATTTGGCTCTAATGATTGCAGGAACCAAATACAGAGGGCAGTTTGAAGAACGCATCAAAGCTGTGATGGATGAAG
TTCGTAAACATGGGAACATCCTCTTATTTATTGATGAGCTTCACACGATTGTTGGTGCAGGAGCTGCTGAAGGAGCTATC
GATGCTTCTCATATTCTAAAACCAGCTCTAGCTCGAGGAGAAATTCAGTGCATTGGCGCTACGACCCTAGATGAATACCG
TAAACATATAGAAAAAGATGCCGCTTTAGAACGTCGGTTCCAAAAAATCGTTGTTCAACCTCCTAGCGTCGATGAAACAG
TAGAAATTCTCAGAGGTTTAAAGAAAAAATACGAAGAGCATCACAATGTCTTCATCACTGATGAAGCACTCGTTGCTGCA
GCTAAACTCTCTGACCAATATGTTCATGGTCGATTTCTTCCTGATAAAGCAATTGACCTCTTGGATGAAGCTGGAGCTCG
TGTACGAGTCAATACGATGGGACAACCTTCGGACCTGATGCGTCTAGAAGCTGAGATAGAAAAAACAAAACAAGCTAAAG
AGCAAGCTATCGGAACTCAGGAATACGAAAAAGCTGCTAGCCTTCGTGATGAAGAGAAGAAGTTAAGAGAAAAATTAGGA
AATATGAAACAACAGTGGGAGTCCAATAAGGAAGAACATCAAGTTCCCGTTGATGAAGAAGCTGTTGCACAAGTAGTTTC
CGTACAAACAGGAATTCCTGCAGCTCGTTTAACAGAAGCTGAAAGCGAAAAACTTTTAACCTTAGAAACGACTCTACAAA
AGAAAGTAATCGGCCAAAGTCAAGCTGTTGCTAGTATCTGTAGAGCTATCCGTCGTTCTAGAACAGGCATCAAAGATCCT
AATAGACCTATGGGATCCTTCCTATTTTTGGGCCCAACTGGTGTCGGGAAGACTTTATTAGCGCAGCAAATCGCAATTGA
GATGTTTGGAGGAGAAGATTCTCTTATTCAAGTGGACATGTCTGAGTACATGGAAAAATTTGCAGCCACTAAGATGATGG
GATCTCCTCCAGGATATATCGGTCATGAGGAAGGGGGTCATCTAACAGAGCAAGTCCGTCGCCGCCCTTACTGTGTTGTG
TTGTTTGATGAAATTGAAAAAGCACATCCAGATATTATGGACCTTATGCTTCAGATTTTGGAGCAAGGGCGTTTAACAGA
CTCATTTGGACGTAAGATCGATTTTCGTAATACCATCATCATTATGACTTCTAACCTAGGAGCAGATTTAATTCGGAAAA
GTGGTGAAATAGGGTTTGGGCTTCGTTCTCACATGGACTATGCAGTTATCAAAGAGAAAATAGATGCTGCAGTTAAGAAG
CATTTAAAACCTGAGTTTATCAACCGTTTAGATGAGAGTGTTATCTTTAAGCCTCTTGAAAAAGAAGCTCTTTCAGAGAT
TATCCATCTAGAAATTAATAAGCTGGGCTCTCGTTTACAAAACTATCAAATGGATCTTAATATTCCTGATTCAGTGATTT
CCTTTTTGGTAACTAAAGGGCATTCGCCAGAAATGGGAGCTCGACCTTTAAGACGTGTTGTGGAGCAGTATCTGGAGGAT
CCTTTGGCAGAAATGCTATTGAAAGAGTCTTGCCGACAAGAAGCTAGAAAATTACGCGCGCGCCTCACAGAAGAACGCGT
TGTTTTCGAAAGAGAAGAAGAAGCTGTTTCTGCTTTAGCTATAGAAGGCGATGGCTCAGAGCCTATTACAGCTGATGAAT
CATAG

Protein sequence :
MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAKHEVERLIGYGPEIQVYGDPA
LTGRVKKSFESANEEAALLEHNYVGTEHLLLGILNQSDGVALQVLENLHVDPKEIRKEILKELETFNLQLPPSSSITPRN
TNSSSSSKSSSPLGGHTLGGDKPEKLSALKAYGYDLTEMFKESRLDPVIGRSAEVERLILILCRRRKNNPVLVGEAGVGK
TAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAI
DASHILKPALARGEIQCIGATTLDEYRKHIEKDAALERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAA
AKLSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPSDLMRLEAEIEKTKQAKEQAIGTQEYEKAASLRDEEKKLREKLG
NMKQQWESNKEEHQVPVDEEAVAQVVSVQTGIPAARLTEAESEKLLTLETTLQKKVIGQSQAVASICRAIRRSRTGIKDP
NRPMGSFLFLGPTGVGKTLLAQQIAIEMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYIGHEEGGHLTEQVRRRPYCVV
LFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKSGEIGFGLRSHMDYAVIKEKIDAAVKK
HLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNYQMDLNIPDSVISFLVTKGHSPEMGARPLRRVVEQYLED
PLAEMLLKESCRQEARKLRARLTEERVVFEREEEAVSALAIEGDGSEPITADES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-169 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O170_01540 YP_008439645.1 ATP-dependent Clp protease ATP-binding protein VFG0079 Protein 0.0 51
O170_01540 YP_008439645.1 ATP-dependent Clp protease ATP-binding protein VFG0080 Protein 9e-141 49