Gene Information

Name : TPE_2701 (TPE_2701)
Accession : YP_008436309.1
Strain : Treponema pedis T A4
Genome accession: NC_022097
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2770307 - 2771104 bp
Length : 798 bp
Strand : -
Note : -

DNA sequence : 
ATGCAATCCCGTATGCAGGCAAAAGAATTATCCGCAGGATATAACGGCGAAAAAGTATTTGAAAACCTTAATTTAGATAT
TCCTGAGGGTAAAATCACAACGCTTATCGGGGCAAACGGCTCCGGAAAATCCACCATTTTGAAAACGCTGTGCCGTATCC
TTTCTCCCGATTCAGGCTTTGTATATCTGGATAGGGAGGCAATTCATACAATGCCGGCAAAGATTGTTGCGCAAAAACTT
GCTCTTTTACCGCAAGAAACGCAAAGCCCTTACGGTATCACGGTAAGTGATTTGGTTGAATACGGACGATTCCCGTACCG
CTCTTCTTTCGGCGGCCTCAGTATGCAGGATAAAGAAATTATCGGCTGGGCACTTGCCTGTACCGGTATGACAGAGTCGG
CTCACCGAGAGATACGAGAACTGTCGGGAGGACAGCAGCAGCGGGTGCGGATAGCTATGGCGCTTGCACAAAAAACGGAC
ATGTTGTTTTTGGACGAGCCGACAACCTATTTGGATATTGCCCATCAGTTGGACATTCTGTATCTTTTGCGCAAGCTCAA
CAGGGAAAACGGTGTAACCGTCGTAATGGTTCTTCACGATTTGAATCACGCCGTTATGTTTTCCGACTTTCTTGCAGCGA
TAAAAAACGGAAGATTATATGCTTTCGGTACACCGGCAGAGGTTATCACTCCGCAAACCTTGCATGATGTTTTTGATATC
GAGGCGGAGATTATAAACCATCCGGTGTTAGATGTTCCCGTATGCTTCCCGTACAGGAAAACGGAAGGCTTATTTTAA

Protein sequence : 
MQSRMQAKELSAGYNGEKVFENLNLDIPEGKITTLIGANGSGKSTILKTLCRILSPDSGFVYLDREAIHTMPAKIVAQKL
ALLPQETQSPYGITVSDLVEYGRFPYRSSFGGLSMQDKEIIGWALACTGMTESAHREIRELSGGQQQRVRIAMALAQKTD
MLFLDEPTTYLDIAHQLDILYLLRKLNRENGVTVVMVLHDLNHAVMFSDFLAAIKNGRLYAFGTPAEVITPQTLHDVFDI
EAEIINHPVLDVPVCFPYRKTEGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-49 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-50 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-49 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-49 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-44 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-47 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-47 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-47 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-47 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TPE_2701 YP_008436309.1 ABC transporter ATP-binding protein BAC0164 Protein 2e-49 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TPE_2701 YP_008436309.1 ABC transporter ATP-binding protein VFG1042 Protein 2e-49 47
TPE_2701 YP_008436309.1 ABC transporter ATP-binding protein VFG0925 Protein 2e-49 43