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Name : clpA (TPE_0163) Accession : YP_008433795.1 Strain : Treponema pedis T A4 Genome accession: NC_022097 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpA Function : - COG functional category : - COG ID : - EC number : - Position : 161217 - 163748 bp Length : 2532 bp Strand : - Note : - DNA sequence : ATGAAATTGATGATAAGCGATACGGTTCAAACCATTTTTAATGAAGCTACTTTAGAAGCAAAAAAACATAAACATGAGTT TGTAACGCCGGAACATGTGTTGTGGGCTATGATGTTCCACCCTAAAATATTGGAGCTTTTTACTCTTTCGGGTGCGGATT TAGGTTATATGCATGACAGCACCATGGATTATCTTAAAAATAAAGTCCCTTATTTTCCTCAAGATAAAAATGATGAGCCC GTACAAAGTTTGGGGCTGCAAACGGTATTTGACAGAGCCGTGGATTATTGTATAAATTCCGGGAAAAAAATAATAAGTTT TAACAACCTTGTCGTAGGCCTCTTTGACGAAGATAAAAACCATTGTTCTTTTTTTATGAGACAGGGGGGAATAAACCGCC TGCGTCTTTTACAGCTTTTAAGCACGGATGAATTCTATGATGACGGAGAAGCCGATGTAAACTATGTTGAATGTGCAAGT CAAAAAAATGAAGGGCAGCTGTTTGTCGAAGTTGAAACTATAGAGGGCGGTATAGGAATACACGAAAACGACCGCAGTAT AAGAGCTTTTCAGGATTTTATACAGGGTCAAGTAAAAAATAACGGTAAAAGTAACGGAAAAAATGACGATATGAATTTTT CAAGACAAAGCGGCGGAAGAAAAAAAACTAAAACGGTTCTTGAAAGGTTTACCGTAAATTTAACGGAAAAAGCAAGAGAG GGATTGCTTTCTCCTCTTATAGGCAGAACGGAAGAAATAGAAAGAACGATTCAGATTTTATGCAGAAAGCAAAAAAATAA CGTACTCCATGTAGGAAGTGCGGGAGTCGGTAAAACCGCAATAACGGAAGGTCTTGCTCAAAAAATTGCGGAAGGCAATG TTCCTTCTTTTTTAAAAGATGCGAATATTTATGCTGTAAGTATGTCCGATTTAATGGCAGGTTCCAAATTTAGGGGAGAT TTTGAAGACCGCTTAAAACATATAGCGCGTGAAATTGCAGCTGAAAAAAATTCCATTATGTTTATAGATGAAATTCACAC TGTAATAGATACAAACGGCGGCAGCGGTATTGAAGCCCCGGATTTGTTAAAACCTCTTTTAAGCGGCGGAAAAATACGCT GTATAGGGGCTACCACTTATGAAGAATATGAGCGTTACTTTTTAAAAGATAAGGCCCTTGCACGCCGCTTTCAAAAGGTC GATATAGAAGAACCGTCGGAAGACGAAGCTTTAAAAATTCTGCAAGGGTTACGCAGCTCCTATGAGGATTTTCACCGCGT ACGCTATAGCGATGAGGTTTTGCGCGCTGCGGTTCATCTTTCGGCACTTCATATCCGCGAAAGATTTTTACCGGACAAGG CAATAGATTTAATAGATGAAGCGGGAGCTCTTTTAAAAATCAGAGCGGATAAAAATAAATTTGAGTACTCTCTGTCTGAA GAAAGATTTAAAACGGTTCCGCAAACGGAAACCGCCGAAGAGCTTTCACAAAAGACGGAGACGAAAGAAGCTGTAAACCC CGAAAACGGGTTTACTCAAGTAAGCGTTTCGGATATAGATAAGATTGTAGCAAAAACCGCAAAAATCCCTGAACGGGCGG TTTCGGTAAACGAAACGGAAAAGCTCAAAAACTTTGAAGAAATTCTTTCCAAAAAGATTTTCGGACAAGCGGAAGCAATT ACGGGCGTAACAAAGGCGGTAAAAAGGTCAAGAGCGGGCTTTAGGGCCAAAGAAAAACCGGTTGCAAACTTTTTATTTGT GGGACCTACCGGAGTAGGCAAAACGGAACTTGCAAAAACCCTTGCCGAAGAACTCGGTATTCCGCTTCTCCGTTTTGATA TGAGCGAATATCAGGAAAAACATACCGTAAGCCGCCTAATAGGTTCGCCGCCCGGCTATGTCGGCTTTGAAGACGGAGGT CTTTTAACCGAATCCGTCCGTAAACAGCCCAACTCCGTTTTACTTTTAGACGAAATCGAAAAAGCTCACAGGGATATTTA TAATATTCTTTTACAAATTATGGATTATGCCACTCTTACGGATAACCAGGGCAGAAAAGCGAGTTTTAATAATGTCATTT TAATTATGACAAGCAATGCGGGTTCATCGGAAATCGGAAAACCGCTTATCGGGTTCGGAGGGGATACCGTTTCGGAATCC GCAATAGATGAAGCGGTGGAAAAAACTTTTACACCCGAATTCAGAAACAGGCTCGATGCGGTTATAAAATTCGGTCCGCT TACCATGCCGGTAATGAGCTTAATCGTTAAAAAAGAAGTGGAAAAAATAAAAACTCACCTTGCCGAAAAAGAAATTGAAC TTGAGCTTTCAAATGAGGTTATTCCGTTGCTCGCGGAAAAAGGTTATTCGCCGGAATTCGGAGCAAGAAATGCCGCTCGT TTGGTAGAAGATGAATTCGTAACGCCTCTTACCGATATGATTTTGTTCGGTACCGCAAAAAAAGGAGGAGCGGTATCATG TACGGTTGCAAATAAGAGTAAAAAACCTTATTTGAAGTTAAATGTTAAATAA Protein sequence : MKLMISDTVQTIFNEATLEAKKHKHEFVTPEHVLWAMMFHPKILELFTLSGADLGYMHDSTMDYLKNKVPYFPQDKNDEP VQSLGLQTVFDRAVDYCINSGKKIISFNNLVVGLFDEDKNHCSFFMRQGGINRLRLLQLLSTDEFYDDGEADVNYVECAS QKNEGQLFVEVETIEGGIGIHENDRSIRAFQDFIQGQVKNNGKSNGKNDDMNFSRQSGGRKKTKTVLERFTVNLTEKARE GLLSPLIGRTEEIERTIQILCRKQKNNVLHVGSAGVGKTAITEGLAQKIAEGNVPSFLKDANIYAVSMSDLMAGSKFRGD FEDRLKHIAREIAAEKNSIMFIDEIHTVIDTNGGSGIEAPDLLKPLLSGGKIRCIGATTYEEYERYFLKDKALARRFQKV DIEEPSEDEALKILQGLRSSYEDFHRVRYSDEVLRAAVHLSALHIRERFLPDKAIDLIDEAGALLKIRADKNKFEYSLSE ERFKTVPQTETAEELSQKTETKEAVNPENGFTQVSVSDIDKIVAKTAKIPERAVSVNETEKLKNFEEILSKKIFGQAEAI TGVTKAVKRSRAGFRAKEKPVANFLFVGPTGVGKTELAKTLAEELGIPLLRFDMSEYQEKHTVSRLIGSPPGYVGFEDGG LLTESVRKQPNSVLLLDEIEKAHRDIYNILLQIMDYATLTDNQGRKASFNNVILIMTSNAGSSEIGKPLIGFGGDTVSES AIDEAVEKTFTPEFRNRLDAVIKFGPLTMPVMSLIVKKEVEKIKTHLAEKEIELELSNEVIPLLAEKGYSPEFGARNAAR LVEDEFVTPLTDMILFGTAKKGGAVSCTVANKSKKPYLKLNVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-121 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | YP_008433795.1 | ATP-dependent Clp protease, ATP-binding subunit ClpA | VFG0080 | Protein | 5e-117 | 43 |
| clpA | YP_008433795.1 | ATP-dependent Clp protease, ATP-binding subunit ClpA | VFG0079 | Protein | 3e-119 | 42 |
