Gene Information

Name : TPE_1162 (TPE_1162)
Accession : YP_008434793.1
Strain : Treponema pedis T A4
Genome accession: NC_022097
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1259391 - 1260167 bp
Length : 777 bp
Strand : -
Note : -

DNA sequence : 
ATGAATATACTGCAAATTGAACACCTTAATCTTTCTTACGGCAGCTCAAGCATAATAGAAGACTTAAATATTTCCGTACG
GGCGGGACAAATAGTTTCGATAATAGGTCCTAACGCCTCCGGTAAATCTACAATTTTAAAAGCGATTGCAGGAATTTTAA
AGCCGGCATCAGGGAAAATTTTTATTGAAGGTAAAGATATTTCCAAAATGAAAACAAAGGAGCTTGCAAAAAAGGTTTCG
ATATTATTACAGCAAAATAAATATCCGGACGAAATAACGGTTGAAGAACTTATTTTTTTCGGAAGATATCCGCACAAAAA
TAATTTTGAATTTTTTAATCAATCGGATAATGAGATTGTAAAAAAGGTTTTACAGCTTACAAACACCTTCGGCTTACGCC
ATAAAACTTTGGAAACTCTTTCCGGCGGAGAAAGACAGCGGACATGGATTGCAATGGCATTGGCTCAAGAACCTTCCATT
TTATTATTTGATGAACCCACCACTTTTTTAGACCCTGCTCATCAGATAGAATTTTTAGAACTTGTAAACGGGTTAAATAA
AAAAACAAATACCGCAATTATCTTAGTGTTGCACGACTTAAATCAGGCAGCCCGCTACGGCAATTATATTTTTGCTTTAA
AAGATAAAAAACTTTTTGTACAAGGCACACCTGAAAAAGTTTTAACCCCTGAAAATATTCTTTCCATTTATAATATTAAA
ACGGAAGTAGTAAAAGTTTTAAACCATTTAACGGTTGTCCCTATCTCAAATATTTAA

Protein sequence : 
MNILQIEHLNLSYGSSSIIEDLNISVRAGQIVSIIGPNASGKSTILKAIAGILKPASGKIFIEGKDISKMKTKELAKKVS
ILLQQNKYPDEITVEELIFFGRYPHKNNFEFFNQSDNEIVKKVLQLTNTFGLRHKTLETLSGGERQRTWIAMALAQEPSI
LLFDEPTTFLDPAHQIEFLELVNGLNKKTNTAIILVLHDLNQAARYGNYIFALKDKKLFVQGTPEKVLTPENILSIYNIK
TEVVKVLNHLTVVPISNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-46 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-46 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-46 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-46 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-48 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-48 41
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TPE_1162 YP_008434793.1 ABC transporter ATP-binding protein VFG0925 Protein 1e-54 42