Gene Information

Name : TPE_1080 (TPE_1080)
Accession : YP_008434712.1
Strain : Treponema pedis T A4
Genome accession: NC_022097
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1172913 - 1173761 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence :
ATGGATATTTTAACGAAATTGGCAGGCGGAGTAATTATGGATGTTACTACTCCTGAACAGGCAAAGATTGCGGAAAAAGC
GGGAGCCGTTGCGGTTATGGCTCTTGAAAGAATCCCCGCCGATATCCGTGCTGCAGGAGGGGTCTCCCGAATGAGCGACC
CTAAGATGATACGCGAAATTATGAAAGCGGTAAACATTCCTGTTATGGCAAAGGTCCGTATCGGACATTTTATTGAAGCA
AGAATTTTAGAAGCAATCGATATAGATTTTATCGATGAATCTGAAGTCCTTTCGCCTGCCGATGAAGTTTATCATGTCGA
TAAAACTCAATTTAAGGTTCCGTTTGTTTGCGGTGCACGTAATCTGGGCGAAGCTCTCAGACGTATTCAAGAAGGAGCAA
AAATGATTCGCACAAAAGGCGAAGCGGGAACAGGCGATGTTATTCAAGCCGTAAAACATATGAGGCAAATTCAAAGCGAA
ATGAAACAGCTTACGGTTTTAAGAGAAGACGAACTTTATGTTGCCGCAAAGAATTATCAAGTACCCTATTCCCTTGTGGA
ATATGTTCATAAAAACGGAAAACTGCCCGTTCCGAATTTTTCGGCGGGAGGAGTTGCAACACCTGCCGATGCGGCCCTTA
TGGTTCACTTGGGTGCCGACGGCGTTTTTGTAGGAAGCGGGATTTTTAAATCAGGAAACCCCGAAAAAAGAGCTGCGGCA
ATAGTAAAGGCCGTAAAAAATTATAACAACCCTAAAATACTTGCCGAAGTTTCCGAAGATTTGGGGGCTGCTATGGTAGG
CATAAATGAAGAAGAAATAAAGACAATTATGAGTGAAAGAGGTATATAA

Protein sequence :
MDILTKLAGGVIMDVTTPEQAKIAEKAGAVAVMALERIPADIRAAGGVSRMSDPKMIREIMKAVNIPVMAKVRIGHFIEA
RILEAIDIDFIDESEVLSPADEVYHVDKTQFKVPFVCGARNLGEALRRIQEGAKMIRTKGEAGTGDVIQAVKHMRQIQSE
MKQLTVLREDELYVAAKNYQVPYSLVEYVHKNGKLPVPNFSAGGVATPADAALMVHLGADGVFVGSGIFKSGNPEKRAAA
IVKAVKNYNNPKILAEVSEDLGAAMVGINEEEIKTIMSERGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 5e-86 69
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-86 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-86 69