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Name : clpB (TPE_1073) Accession : YP_008434705.1 Strain : Treponema pedis T A4 Genome accession: NC_022097 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 1166545 - 1169124 bp Length : 2580 bp Strand : - Note : - DNA sequence : ATGAATATGGATAAATACACCGTTAAAGCAAGCGAAGCCGTGCAGGAAGCTTCGTCCCTTGCTCAGCGGGACGACCACAG TCAAATTGAAAGCGAACATCTTTTGTATGTTCTTTTGGAACAGGAAGACGGAATTGTTCCGCCGATTGTAGAAAAGATAG GCGTTCAGCCTGATTCTATTTTAGATGAACTTGATAAAATCCTCGATAAAAAGCCCCGAGTTACGGGACAGTCGGCACAA ACTTATATGTCGCCACTTTTGGCAAAAGTGTTTGCCCATGCGGAAGGATATGCCGATAAACTGAAAGACGATTACGTTTC TACAGAGCATTTTCTTTTAGCTTTAACCGAAGCGCAAGATTCTGCGGGAAATCTTTTACGTTCCCGCGGAATAAATTTTA AAGCGGTTCTTTCCGCATTAAAAGAAATACGCGGTAATAACCGTGTTACAACCGATAATCCCGAATCGACTTTTCAAAGT TTGGAAAAATTTTGCCGCGATTTAACACAGCTTGCACGTCAGGAAAAAATAGACCCGGTTATAGGCCGCGATGAAGAAAT AAGGCGTGTTATGCAAGTGCTTTCGCGCCGAACGAAAAACAATCCGGTTTTAATAGGAGAGCCTGGTGTAGGAAAAACCG CAATAGTTGAAGGGCTTGCACGGAGAATTGTTTCAGGCGATGTTCCCGACAGCTTAAAGGGAAAGCGCCTTTTATCGCTT GACTTGGGAGCCTTGGTTGCGGGTGCAAAATTCCGCGGAGAATTTGAAGAGAGGCTTAAGGCTGTAATTTCCGAAGTACA AAAATCGGAAGGCAAGGTTATTTTATTTATAGATGAGCTTCATACTCTGGTAGGAGCCGGTGCGAGTGAAGGGTCTATGG ACGCTTCAAATCTTTTAAAGCCCGCCTTAGCACGGGGAGAACTTCGAGCAATCGGTGCTACTACTCTCAATGAATACCGC AAATATATAGAAAAAGATGCCGCTCTTGAGCGCCGGTTTCAGCAAGTGTATTGCCCGGAACCGACAGTGGAAGATACGAT TGCAATATTGCGCGGTTTGCAGGAAAAATATGAAGTGCATCACGGCGTAAGAATTCGCGATGAAGCGTTAATTGCAGCAG CCGTTCTTTCCGACCGCTACATAACAAGCCGCTTTTTGCCGGATAAGGCAATAGACTTGGTTGATGAAGCCGCAAGCCGT CTTAAAATGGAAATTGAAAGTCAGCCCGTAGAGCTTGACCAGGTCGAACGGAAAATTTTGCAATTAAACATAGAAAAAGT TTCTATCGGTAAAGAATCCGATGCGGCTTCAAAAGAAAGACTTAAAAAAGTGGAAGAAGAACTCGCAGAGCTAAGCGAAA AACGGAATGCTATGCAGGCTCAGTGGCAAAATGAAAAATCCCGCATAGACGAATCCCGTGAATATAAAAAAGAGTTGGAG CAGCTTAGAAATGAAGAAACTCGCTACAGCCGCGAAGGAAATTTAAATAAGGCTGCCGAATTAAAATACGGAAAAATCCC GGAACTTGAAAAAAAGATTGCGGCGGTTACCGCCGAACTTGAAAAAAAAGCGGGTTCCGCAGGACAGCTTTTGCGCGAAG AAGTTTGCGAAGAAGATATAGCTAAAATAGTTTCAATGTGGACGGGGATTCCTGTTGCAAAAATGATGGCAAGCGAAATG CAAAAATACTTGGATTTGGAAAAGGTTTTACAACAGCGAGTTGTCGGACAAGACGAAGCCGTACGGGTTACTGCGGACGC AATCCGCAGAAACAAGGCGGGTCTTTCCGATATGAACCGTCCTTTGGGAAGTTTTTTGTGCATAGGCCCTACAGGTGTCG GTAAAACCGAACTTGCCCGTACGCTTGCGGATTTTTTATTTAATGATGAAAAAGCTTTGACAAGAATCGATATGAGCGAA TATATGGAAAAACATTCCGTAAGCCGCTTAATCGGAGCTCCTCCGGGATATGTCGGTTATGATGAGGGCGGTCAGCTTAC CGAAGCCGTCCGCCGCCGTCCTTACAGCGTAGTCTTATTCGACGAAATCGAAAAAGCACATCAGGATGTGTTTAATGTAT TTTTACAGATTTTAGATGACGGAAGACTTACGGACGGACAGGGCAGAATAATAGATTTTAAAAATACGATTATAATTATG ACGAGCAATATCGGTTCGGAATTTATTCTCGGTGCAAAAGATATGAAGAGTATAAAACCGCAAATTACCGAAATTTTACG CGCTAACTTTAAACCCGAATTTTTAAACCGTATTGATGAAATTATTACATTTAACCGGCTCGAAAAAGAACATATACGTA AGATTGTTGAAATCCAGCTCGCTTCCGTTGCGGAGCGTCTTCAAGCCCGCCGCTTGAATTTAAAAGTTTCGGACGCCGCA AAGGATTTACTTGCCGACATAGGCTTTGACCCGATGTTCGGGGCAAGACCTTTAAAAAGGGCAATTCAAGCAGAACTTGA AAATAAACTTGCACGTGAAGTGCTTGAAGGTAAATTCCCGGAAGGCTCTACTATCTTTGTCGATAAGGGAGAAGCGGGAT TAACTTTTAAAAAAGGGTAA Protein sequence : MNMDKYTVKASEAVQEASSLAQRDDHSQIESEHLLYVLLEQEDGIVPPIVEKIGVQPDSILDELDKILDKKPRVTGQSAQ TYMSPLLAKVFAHAEGYADKLKDDYVSTEHFLLALTEAQDSAGNLLRSRGINFKAVLSALKEIRGNNRVTTDNPESTFQS LEKFCRDLTQLARQEKIDPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSGDVPDSLKGKRLLSL DLGALVAGAKFRGEFEERLKAVISEVQKSEGKVILFIDELHTLVGAGASEGSMDASNLLKPALARGELRAIGATTLNEYR KYIEKDAALERRFQQVYCPEPTVEDTIAILRGLQEKYEVHHGVRIRDEALIAAAVLSDRYITSRFLPDKAIDLVDEAASR LKMEIESQPVELDQVERKILQLNIEKVSIGKESDAASKERLKKVEEELAELSEKRNAMQAQWQNEKSRIDESREYKKELE QLRNEETRYSREGNLNKAAELKYGKIPELEKKIAAVTAELEKKAGSAGQLLREEVCEEDIAKIVSMWTGIPVAKMMASEM QKYLDLEKVLQQRVVGQDEAVRVTADAIRRNKAGLSDMNRPLGSFLCIGPTGVGKTELARTLADFLFNDEKALTRIDMSE YMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVVLFDEIEKAHQDVFNVFLQILDDGRLTDGQGRIIDFKNTIIIM TSNIGSEFILGAKDMKSIKPQITEILRANFKPEFLNRIDEIITFNRLEKEHIRKIVEIQLASVAERLQARRLNLKVSDAA KDLLADIGFDPMFGARPLKRAIQAELENKLAREVLEGKFPEGSTIFVDKGEAGLTFKKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-106 | 44 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-155 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-105 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-105 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_008434705.1 | ATP-dependent Clp protease, ATP-binding subunit ClpB | VFG2084 | Protein | 4e-111 | 44 |
| clpB | YP_008434705.1 | ATP-dependent Clp protease, ATP-binding subunit ClpB | VFG2076 | Protein | 7e-120 | 43 |
