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Name : OCC_06561 (OCC_06561) Accession : YP_008428961.1 Strain : Thermococcus litoralis DSM 5473 Genome accession: NC_022084 Putative virulence/resistance : Unknown Product : phosphomethylpyrimidine synthase Function : - COG functional category : - COG ID : - EC number : - Position : 855055 - 856344 bp Length : 1290 bp Strand : - Note : catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAGCCAAATGGAGGAGGCAAGGAAGGGTGTAATTACTGAGGAGATGAAGTTTGTGGCTGAAAAGGAAGGTATTGACCC AGAAAAGCTTAGAAGGAGTGTTGCAAAAGGTTATACTGTAATTTTCCGCAATGTGCGTCACGATTGGGTAAAGCCCGTTG CCGTAGGCATGGGCGTGAGAGTAAAGGTAAACGCCAACATCGGGACCTCTAGAGATATAGTGGACGTTGAGGCGGAAATA GAAAAGGCCAAGATAGCAGTGAAGTATGGTGCTGACACAATAATGGACCTCTCCACCGGTGGAGACCTCGATGCCATAAG GAAGAGAATTATGAGGGCCGTTGACGTTCCTGTTGGAACAGTTCCAATTTACCAAGCGGCTGAAGAGATGCTCGCAAAAG GGAAGGCAATTATAGAGATGAGCGAGGATGATATGTGGAATGCAGTAGAGAAGCACTTTAAAGACGGAGTCGACTACGTC ACCATACATGTGGGCGTAACCAAAGAAGTTGTTGAAAAAATGAAGCGCACGAAGAGAATAGTCGGCATGGTCTCTCGCGG TGGAACGTTTTTGGCAGCGTGGATACTCCACTGGGGAGAGGAAAATCCGTTCTACAGGAACTACGACTACCTTCTGGAAC TTGCCAAAGAATACGATGTTGTTCTCAGCTTAGGGGATGGCCTAAGACCCGGTGGTTTACCAGATGCTGGAGATGAGCTT CAAATAGCCGAACTCTATACCATAGGAAAGCTTGTGAAGAGGGCAAGGGATTTTGGAGTTCAAACTATGGTTGAAGGGCC AGGCCATGTTCCGATAGACCAGATTCCAATGCACATAAAGATTGCAAAAGTCGCGACTGATAACGCTCCCTTCTACGTCC TTGGTCCAATTGTCACGGACATCTTTCCGGGCTATGACCACATCGCTGGAGCGATTGGGGGGGCAATTGCCGCTATGCAC GGAGCAGACTTTCTCTGCTATGTAACTCCAGCGGAACACTTGGGATTACCGGATAAGGAACATGTTCGCCTTGGGGTAAT AGCCACTAAGCTTGCTGCCCATGCTGTGAACCTAACCCGCTTTAGCGAAGATTACATGAAAGATCACCTCATGAGCCTTG CAAGAGGCTTCCTAGACTGGACAAGGCAGTTTGAACTAGCTGTTGACAAGGAGCGCTTTTTGGAAATTAGGAACAAACGG CCGACCTCAACCGAAGCCTGTAGTATGTGCGGGGATTTATGTGCGATAAAGCTCATAAACAGCATGCTTAGGGGAAAGGG TGAGGCTTAA Protein sequence : MSQMEEARKGVITEEMKFVAEKEGIDPEKLRRSVAKGYTVIFRNVRHDWVKPVAVGMGVRVKVNANIGTSRDIVDVEAEI EKAKIAVKYGADTIMDLSTGGDLDAIRKRIMRAVDVPVGTVPIYQAAEEMLAKGKAIIEMSEDDMWNAVEKHFKDGVDYV TIHVGVTKEVVEKMKRTKRIVGMVSRGGTFLAAWILHWGEENPFYRNYDYLLELAKEYDVVLSLGDGLRPGGLPDAGDEL QIAELYTIGKLVKRARDFGVQTMVEGPGHVPIDQIPMHIKIAKVATDNAPFYVLGPIVTDIFPGYDHIAGAIGGAIAAMH GADFLCYVTPAEHLGLPDKEHVRLGVIATKLAAHAVNLTRFSEDYMKDHLMSLARGFLDWTRQFELAVDKERFLEIRNKR PTSTEACSMCGDLCAIKLINSMLRGKGEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-54 | 41 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-54 | 41 |
