Gene Information

Name : OCC_05686 (OCC_05686)
Accession : YP_008429540.1
Strain : Thermococcus litoralis DSM 5473
Genome accession: NC_022084
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1374230 - 1375387 bp
Length : 1158 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAGGTTTTCCACAAAGGCGATTCATATCGGAGAGGAACCTGAAAGAATGCAGTATGGGGATGTAGTTTCTCCTATTCA
CCTCTCAACAACTTTTGCAAAAAAGAGCATAAAAGAAGTGGAGGAGGGCTATGTCTACTCAAGGAGCGGTAACCCCACAA
GGAACAGCCTTGAGAGAAAGCTTGCGGCACTTGAGAATGCCAAGTATGGGTTGGCTTTTTCCTCAGGGCTCGCGGCGGAG
TCAACGGTACTCTTGGCGTTGTTGAAGAAGGGCGACCACGTTGTGACCTTTGACGACCTCTACGGCGGCACGAAGAGGCT
CTTCAATCAGATAATGGAGCGCTTCGGACTTGAGTTCACCTACGTCGATGCGAGAAATCCAGAGAACGTTAGAAAGGCAA
TAAGGAAAAACACGCGGATGATCTGGCTTGAAACTCCCACAAACCCGCTCCTGAAGCTTGCGGACATAAAGGCGATAGCA
GAGATCGCCCACGAGGAGGGCATCATAGTGGTAGTGGACAACACCTTTGCGAGTCCCTACTTCCAGAACCCCCTCGACCT
CGGAGCGGACATAGTGCTCCACAGCGTCACCAAGTACCTCGGCGGACACTCGGATGTCGTCGGTGGAGCGGTTATGGTAA
ACGATGAGGAGCTCTATGAAAAGCTCAAGTTCCACCAGAACGCGGTTGGAGCGGTTCTTTCGCCCTTCGATTCCTGGCTG
GTCATGAGGGGCATCAAAACTCTCTCCCTCAGGATGGAGAGGCACGAGAAGAACGCCATGGCAATAGCGAAGTACCTCGA
GGGGCACCCGCTGGTTAAGCGCGTTTACTATCCAGGTTTGCCGTCTCATCCACAGCACGAGCTCGCGAAGAGACAGATGA
GCGGCTTCGGTGGGATGCTTTCATTTGAGCTTAAAGGGGGTCTTGAGAAGGCCATAAAGTTCGTTGAGAGCTTAGAGATC
TTCGCACTTGCTGAGAGCCTTGGCGGAGTGGAGTCCCTTATAGAACTGCCGGCGATCATGACGCACGCCTCCGTCCCCAA
GGAAGAGAGGGAGAGAGTGGGGATAAGAGACTCGCTCATCAGAGTCTCAGTTGGAATAGAGGACGTCGAGGATCTCATCG
AAGATCTTGAGAGAGGGTTCCAGGCGGTGGGAGAATGA

Protein sequence :
MRFSTKAIHIGEEPERMQYGDVVSPIHLSTTFAKKSIKEVEEGYVYSRSGNPTRNSLERKLAALENAKYGLAFSSGLAAE
STVLLALLKKGDHVVTFDDLYGGTKRLFNQIMERFGLEFTYVDARNPENVRKAIRKNTRMIWLETPTNPLLKLADIKAIA
EIAHEEGIIVVVDNTFASPYFQNPLDLGADIVLHSVTKYLGGHSDVVGGAVMVNDEELYEKLKFHQNAVGAVLSPFDSWL
VMRGIKTLSLRMERHEKNAMAIAKYLEGHPLVKRVYYPGLPSHPQHELAKRQMSGFGGMLSFELKGGLEKAIKFVESLEI
FALAESLGGVESLIELPAIMTHASVPKEERERVGIRDSLIRVSVGIEDVEDLIEDLERGFQAVGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-78 50
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-79 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-63 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCC_05686 YP_008429540.1 cystathionine beta-lyase BAC0207 Protein 1e-63 44