Gene Information

Name : N559_4558 (N559_4558)
Accession : YP_008427439.1
Strain : Klebsiella pneumoniae JM45
Genome accession: NC_022082
Putative virulence/resistance : Virulence
Product : transcriptional activator protein Irlr
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4652563 - 4653246 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
GTGAAGATTTTGATTGTCGAAGATGAGAAGAAAACCGGAGAGTACCTGACCAAAGGGCTCACCGAGGCCGGCTTCGTCGT
CGACCTGGCCGATAACGGCCTCAACGGCTATCACCTGGCGATGACCAGCGATTACGATCTGCTGATCCTCGACATCATGC
TGCCGGATGTGAACGGTTGGGATATCGTGCGCATGCTGCGCGCCGCCGGGAAAGGCATGCCGATCCTGCTGCTTACCGCG
TTGGGCACCATTGAGCATCGGGTGAAGGGGCTGGAGCTGGGCGCTGACGACTATCTGGTAAAACCGTTCGCCTTTGCGGA
GCTGCTGGCGCGGGTGCGTACTCTGCTGCGCCGCGGGGCGGCGGTCATCGTCGAAAGCCAGTTTCAGGCGGCCGATCTCA
GCGTCGATTTGGTCAGCCGCAAGGTGACGCGCGGTGCCACCCGCATCACCCTGACCAGTAAGGAATTCACGCTGCTGGAG
TTCTTCCTGCGTCATCAGGGCGAGGTGCTGCCCCGTTCGTTAATTGCCTCGCAGGTGTGGGATATGAACTTCGACAGCGA
CACTAACGCCATTGACGTGGCGGTGAAGCGGCTGCGCGCCAAAATTGATAACGACTTCGAGCCGAAGCTGATCCAGACCG
TGCGCGGCGTCGGCTATATGCTTGAGGTGCCGGATGGCCGCTAA

Protein sequence : 
MKILIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTSDYDLLILDIMLPDVNGWDIVRMLRAAGKGMPILLLTA
LGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGAAVIVESQFQAADLSVDLVSRKVTRGATRITLTSKEFTLLE
FFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRAKIDNDFEPKLIQTVRGVGYMLEVPDGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-55 52
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-55 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_4558 YP_008427439.1 transcriptional activator protein Irlr BAC0111 Protein 3e-100 95
N559_4558 YP_008427439.1 transcriptional activator protein Irlr BAC0347 Protein 1e-87 83
N559_4558 YP_008427439.1 transcriptional activator protein Irlr BAC0083 Protein 6e-71 63
N559_4558 YP_008427439.1 transcriptional activator protein Irlr BAC0638 Protein 1e-63 62
N559_4558 YP_008427439.1 transcriptional activator protein Irlr BAC0308 Protein 2e-63 59
N559_4558 YP_008427439.1 transcriptional activator protein Irlr BAC0197 Protein 7e-63 59
N559_4558 YP_008427439.1 transcriptional activator protein Irlr BAC0125 Protein 6e-65 56
N559_4558 YP_008427439.1 transcriptional activator protein Irlr AE000516.2.gene3505. Protein 5e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_4558 YP_008427439.1 transcriptional activator protein Irlr VFG0596 Protein 2e-55 52
N559_4558 YP_008427439.1 transcriptional activator protein Irlr VFG1390 Protein 3e-45 46