Gene Information

Name : N559_4320 (N559_4320)
Accession : YP_008427213.1
Strain : Klebsiella pneumoniae JM45
Genome accession: NC_022082
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4397964 - 4399349 bp
Length : 1386 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAACAGAACAGCTGATCCCCCTCTGCCGTCGCTACCACGCCATGCTGCTGCATAGCGATGAACAGACAATCTCTAT
TGCGGTGGTTAATACCCCGCCGGCGGAGTTAATGGAGGCGCTACGCTTCGCGACGCAAAAGCGGATCGACATTGAATGCT
GGAGCCAGGAGCAGATGGATAAGCGTCTGCAGGCCCAGGAAAAGCAGGCGCAACTGGCGCAGAACGACGGGCCGGAAAAT
ATCGCCGAACGGGTCAACCAGATCCTCGAACAGGCCCTGCGTCAGCGGGCGTCTGATATTCATATCGAGCCCACGGAAAC
GCACTTACGCATCCGCCTGCGGGTCGATGGCGTCCTTCACGCCCTACCGTTGCTGGCTCCCGAACTGGCCGCACCGGTTA
TCGCGCGACTCAAGGTCCTGGCCAGTCTCGATATCGCCGAGCACCGTTTACCGCAGGATGGCCAGTTCGCGCTGAATCTT
GCGGGACGACCGCTCTCTTTTCGCATCGCCACTCTGCCCTGCCGCTATGGCGAAAAGATTGTCCTGCGCCTTCTGCATCA
GGTTGACCAGGCGCTGGATCTGGAAGCACTCGGACTCTCATCCTCCCAGCTGGCGGCCTTTCGCCAGGCGCTGAACCAGC
CGCAGGGTCTGCTGCTGGTCACCGGCCCAACCGGAAGCGGGAAAACGGTGACCCTCTACAGCGCCCTGCAGGCCAGAAAC
CGTGAGCAAGTGAATATCTGTAGCGTGGAGGATCCACTGGAGATCCCCATCGCCGGGATGAACCAGACGCAAATCAATCC
CCGCGCCGGACTCACTTTTCACAGTGTGCTGCGCGCCCTGTTACGCCAGGATCCGGATATTGTCATGGTGGGCGAGATCC
GCGATGCCGAGACCGCTGAAATCGCGCTCAAAGCCGCCCAGACCGGTCATCTGGTGCTCTCCACCCTGCACACCAATTCC
ACCAGTGAAACCCTGACCCGCCTGCAGCAAATGGGCATCGCCCGCTGGATGATTTCCTCTGCGCTCTCGCTGGTCATCGC
CCAGCGTCTGGTCCGCAAGCTGTGTCCCCACTGTCGGCGTAATGCCGGCAGCGCCGCCGACCTGCCGCACAGCCTGTGGC
CCCGCCCGCTGCCACGCTGGCAGGCAGCGGGCTGCGAACATTGTTACCACGGATATTACGGCCGGCTGGCGCTGTTCGAA
GTGCTGCCTGTTACCCCCGGGCTACGCCAGGGGATAGTCCAGGGACTTAACGCCATTGAGATTGAATCTCTGGCGCGAGC
CGCAGGGATGATGACGCTTTTTGAAAGCGGCTGTCAGGCTATCGAACAGGGATTGACCAGCCTCGAAGAGGTGGTGCGGG
TGCTGGGGATCCCCCATGGCGACTAA

Protein sequence : 
MKTEQLIPLCRRYHAMLLHSDEQTISIAVVNTPPAELMEALRFATQKRIDIECWSQEQMDKRLQAQEKQAQLAQNDGPEN
IAERVNQILEQALRQRASDIHIEPTETHLRIRLRVDGVLHALPLLAPELAAPVIARLKVLASLDIAEHRLPQDGQFALNL
AGRPLSFRIATLPCRYGEKIVLRLLHQVDQALDLEALGLSSSQLAAFRQALNQPQGLLLVTGPTGSGKTVTLYSALQARN
REQVNICSVEDPLEIPIAGMNQTQINPRAGLTFHSVLRALLRQDPDIVMVGEIRDAETAEIALKAAQTGHLVLSTLHTNS
TSETLTRLQQMGIARWMISSALSLVIAQRLVRKLCPHCRRNAGSAADLPHSLWPRPLPRWQAAGCEHCYHGYYGRLALFE
VLPVTPGLRQGIVQGLNAIEIESLARAAGMMTLFESGCQAIEQGLTSLEEVVRVLGIPHGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 8e-73 48
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-73 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_4320 YP_008427213.1 hypothetical protein VFG2048 Protein 9e-75 49
N559_4320 YP_008427213.1 hypothetical protein VFG2426 Protein 5e-72 47
N559_4320 YP_008427213.1 hypothetical protein VFG0182 Protein 5e-69 47