Gene Information

Name : N559_4297 (N559_4297)
Accession : YP_008427192.1
Strain : Klebsiella pneumoniae JM45
Genome accession: NC_022082
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4372458 - 4373336 bp
Length : 879 bp
Strand : +
Note : -

DNA sequence :
GTGATCCACGATGTTGTCACTGAGTTAGCGAAGCAGGCCCCGATCAAGCAGGTCTGTCAGGCGTTGGACATCAGTCGCTC
TGGTTACTACGCAGCGCGTCGCAGAGTCAATACACCCAAACCTATTTGCCAGGACAGCGTGCATGCTCAGGCGGTTTTTC
TTGCCAGTGGTCGCACCTATGGCAGTCGTCGTTTGAGTGCAGCCCTGCGTGCCCAGGGCCATGATGTTGGACGTCATCGC
TGTCGTACCTTGATGAAAGCCTGTGGACTCAAGGCCTGTTGGCGTCGCAAGTTCGCTCATACCACCGATAGCAAACACCA
TTTGCCGGTGGCAGAGAACGTGCTCAACCGTCAGTTTGAGCCTGAAGCACCCAATACGGCCTGGGTGTGCGATGTGACGT
ACATTCGGACCGACAGCGGTTGGCTATATCTGGCCGCTGTGCTGGATCTGTATTCACGTCGCATCGTGGGTTGGTCCATG
GCACCGACCATGCCTGCACAGCTGGTGTGCGATGCGTTGAGCATGGCTATTTCGGTTCGCCAACCGGCACCGGGTTTATT
GGTTCATTCGGACCGGGGCAGTCAATATGCCAGTGCTGAACACCGGCAATTACTTGAAAACCATGGTCTGGTACTCAGCA
TGAGCCGCAAGGGTAATTGCTGGGACAATGCCGTGATGGAGCGGTTCTTTCTGAATTTGAAAATGGAGCGTGTCTGGCAG
ACTCGGTATGCCAACCATACAGAAGCCAAACAAGACATCACCGACTACATCGTTAACTTTTATAACAGTACCCGATTGCA
TTCAAAACTTGGCTACCGATCACCCGCACAGTACGAAACGCTGGCCAGCCCTGCCGCCCAGTTGCCCGCCTGTGCATAA

Protein sequence :
MIHDVVTELAKQAPIKQVCQALDISRSGYYAARRRVNTPKPICQDSVHAQAVFLASGRTYGSRRLSAALRAQGHDVGRHR
CRTLMKACGLKACWRRKFAHTTDSKHHLPVAENVLNRQFEPEAPNTAWVCDVTYIRTDSGWLYLAAVLDLYSRRIVGWSM
APTMPAQLVCDALSMAISVRQPAPGLLVHSDRGSQYASAEHRQLLENHGLVLSMSRKGNCWDNAVMERFFLNLKMERVWQ
TRYANHTEAKQDITDYIVNFYNSTRLHSKLGYRSPAQYETLASPAAQLPACA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 4e-41 48
tnpB CAB61574.1 transposase B Not tested HPI Protein 5e-41 47
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 8e-45 45
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-45 45
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-44 44
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-44 44
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 1e-44 44
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 7e-45 44
unnamed AAF09030.1 unknown Not tested SHI-O Protein 7e-45 44
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 7e-45 44
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-45 44
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 9e-42 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 9e-42 44
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 9e-42 44
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-40 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-40 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-40 42
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 5e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_4297 YP_008427192.1 integrase catalytic subunit VFG1706 Protein 4e-45 45