|
Name : N559_4259 (N559_4259) Accession : YP_008427159.1 Strain : Klebsiella pneumoniae JM45 Genome accession: NC_022082 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 4340472 - 4342445 bp Length : 1974 bp Strand : + Note : - DNA sequence : ATGAAAAGCCTGCGAAAAATGCTGCCTGCGCTGCTGATATTAACCCCGCTGCTATTTTCTCCGGCCGCCGCGGAGGAATT TTCCGCCAGTTTTAAAGGCACCGATATCCAGGAATTTATCAATACCGTCAGCAAAAACCTGAATAAAACGGTGATTATCG ATCCCAGCGTACGCGGTACTATCACCGTGCGCAGTTACGATATGCTCAATGAAGAACAATATTATCAATTCTTCCTCAGC GTGCTGGATGTATATGGCTTCGCCGTGATCAATATGAATAACGGCGTGCTAAAAGTGGTCCGCGCCAAAGACGCCAAGAC CTCGGCCGTGCCGGTCGCCAGCGCGGCCGCGCCGGGCGAAGGCGATGAAGTGGTCACCCGGGTGGTGCCCCTGACCAACG TCGCCGCCCGCGATCTCGCCCCGCTGCTCCGCCAGCTGAACGATAACGCTGGCGCCGGCAGCGTGGTCCATTATGAGCCC TCCAACGTACTGCTGATGACCGGCCGCGCGGCGGTTATCAAACGCCTGCTGACCATTGTCGAGCGCGTCGACAACGCCGG GGATCGCAGCGTGGTGACCGTGCCCCTTTCCTGGGCCTCCGCCGCGGAAGTAGTCAAACTGGTTACCGAGCTTAATAAAG ATACCAGCAAGTCGGCGCTGCCGGGCTCGATGGTGGCGAACGTGGTGGCCGATGAGCGCACCAACGCGGTACTGGTGAGC GGCGAACCAAACTCGCGCCAGCGCATCATCGCCATGATCAAACAGCTCGACCGCCAGCAGGCGGTACAGGGTAACACCAA AGTGATCTACCTGAAGTACGCCAAAGCCGCCGATCTGGTGGAGGTTCTGACCGGGATCAGCAGCTCGCTGCAGAGCGACA AGCAAAGCGCCAGGCCAGTGGCCGCGATCGACAAAAATATTATTATCAAAGCCCACGGCCAGACCAACGCCCTGATCGTC ACCGCGGCGCCGGACGTGATGAACGATCTTGAGCGGGTGATCGCCCAGCTCGATATCCGCCGCCCGCAGGTGCTGGTGGA GGCGATTATTGCCGAAGTGCAGGATGCCGATGGCCTTAATCTCGGTATCCAGTGGGCAAACAAAAACGCCGGCATGACGC AGTTCACCAACAGCGGTTTGCCGATATCGACGGCTATCGCCGGCGCCAACCAGTACAACAAAGACGGTACCATCAGCAGC TCGCTGGCCAGCGCCCTCGGCTCGTTTAACGGTATCGCCGCCGGCTTCTATCAGGGGAACTGGGCGATGCTGCTCACCGC CCTCTCCAGCAGTACCAAGAACGATATTCTGGCCACCCCCAGCATCGTCACCCTCGATAACATGCAAGCCACTTTTAACG TCGGCCAGGAAGTTCCGGTATTAACCGGCTCGCAAACCACCTCAGGCGACAACATCTTCAATACCGTCGAGCGCAAAACC GTCGGCATTAAACTGAAGGTGAAGCCGCAGATTAACGAAGGCGATGCGGTGCTGCTGGAGATTGAGCAGGAGGTATCGAG CGTTGCCGACTCGGCCTCCAGCACCAGCAGCGATCTCGGGGCGACCTTCAATACCCGGACGGTGAATAACGCCGTGCTGG TCGGCAGCGGCGAAACGGTGGTGGTTGGCGGGCTGCTGGATAAAACCGTCACCGATACCGCTGACAAAGTGCCGCTGCTC GGGGATATTCCGGTGATCGGCGCCCTGTTCCGCTCCGACAGCAAGAAAGTGTCGAAACGCAACCTGATGCTGTTTATCCG CCCGACCATCATTCGCGATCGCGATGAGTACCGCCAGGCTTCTTCCGGCCAGTACACCGCCTTCAACAATGCGCAAACTA AACAGCGGGGTAAAGAAAGCAGCGAAGCGTCGCTCAGCAACGACCTGCTGCACATCTATCCGCAGCAGGAGACCCAGGCC TTCCGCCAGGTCAGCGCCGCCATTGACGCCTTCAATCTCGGAGGCCGCCCATGA Protein sequence : MKSLRKMLPALLILTPLLFSPAAAEEFSASFKGTDIQEFINTVSKNLNKTVIIDPSVRGTITVRSYDMLNEEQYYQFFLS VLDVYGFAVINMNNGVLKVVRAKDAKTSAVPVASAAAPGEGDEVVTRVVPLTNVAARDLAPLLRQLNDNAGAGSVVHYEP SNVLLMTGRAAVIKRLLTIVERVDNAGDRSVVTVPLSWASAAEVVKLVTELNKDTSKSALPGSMVANVVADERTNAVLVS GEPNSRQRIIAMIKQLDRQQAVQGNTKVIYLKYAKAADLVEVLTGISSSLQSDKQSARPVAAIDKNIIIKAHGQTNALIV TAAPDVMNDLERVIAQLDIRRPQVLVEAIIAEVQDADGLNLGIQWANKNAGMTQFTNSGLPISTAIAGANQYNKDGTISS SLASALGSFNGIAAGFYQGNWAMLLTALSSSTKNDILATPSIVTLDNMQATFNVGQEVPVLTGSQTTSGDNIFNTVERKT VGIKLKVKPQINEGDAVLLEIEQEVSSVADSASSTSSDLGATFNTRTVNNAVLVGSGETVVVGGLLDKTVTDTADKVPLL GDIPVIGALFRSDSKKVSKRNLMLFIRPTIIRDRDEYRQASSGQYTAFNNAQTKQRGKESSEASLSNDLLHIYPQQETQA FRQVSAAIDAFNLGGRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 5e-128 | 47 |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-122 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| N559_4259 | YP_008427159.1 | general secretion pathway protein D | VFG2047 | Protein | 3e-120 | 46 |
