Gene Information

Name : N559_4214 (N559_4214)
Accession : YP_008427118.1
Strain : Klebsiella pneumoniae JM45
Genome accession: NC_022082
Putative virulence/resistance : Virulence
Product : lysine decarboxylase 2, constitutive
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4288147 - 4290336 bp
Length : 2190 bp
Strand : -
Note : -

DNA sequence :
ATGATGCTTGACTTAGGTGAATACCAGGAGGAAAGCGTGAATATCATCGCCATCATGGGGCCTCACGGCGTCTACCACAA
AGACGAGCCGATCAAAGAACTGGAAGCGGCGCTGCAGCGCCAGGGCTTCCAGACCATCTGGCCGCAAAACAGCGCCGACC
TGCTGCAGTTTATCGAGCACAACCCGCGCATCTGCGGGGTGATCTTCGACTGGGATGAATACAGCGTCGATCTGTGCAGC
GATATCAATCAGCTCAATGAATACCTTCCTCTGTACGCCTTTATTAACGCCCACTCGACGATGGATGTCAGCAGTCAGGA
TTTGCGCATGACGCTGTGGTTCTTCGAATATGCGCTGGGACTCTCCGAAGAGATCGCCACCCGCATTGGGCAGTACACCC
GCGAGTACCTGGAGAATATCACTCCGCCGTTTACCCGCGCGCTGTTCAACTATGTCCAGGAGGGAAAATATACCTTCTGT
ACGCCGGGTCATATGGGCGGCAGCGCCTATCAGAAAAGCCCGGTGGGCTGCCTGTTCTATGATTTTTTTGGCGGGAATAC
GCTGAAGGCGGATGTCTCGATTTCGGTCACCGAGCTGGGCTCCCTGCTGGATCATACCGGCCCGCACCTGGAGGCGGAGG
AGTATATCGCGCGCGCCTTTGGCGCCGAGCAAAGCTATATGGTGACCAACGGCACCTCGACGTCCAATAAAATTGTCGGC
ATGTACTCGGCGCCCGCCGGCAGCACCCTGCTGATTGACCGTAACTGTCACAAATCGCTGGCCCACCTGCTGATGATGAG
CGATGTGGTTCCCCTGTGGCTGAAGCCGACCCGCAACGCGCTGGGGATCCTCGGCGGTATCCCCCGGCGCGAATTTACCC
GCGACAGCATTCAGCAGAAAGTGCGCGACACGGGCGGGGCGCAGTGGCCCGTGCATGCGGTGATCACCAACTCCACCTAC
GATGGTCTGCTCTATAACACCACCTGGCTTAAGGAGACGCTCGATGTCCCGTCGATCCATTTCGATTCCGCCTGGGTGCC
CTATACCCATTTCCATCCGATATATCAGGGGAAAAGCGGTATGAGCGGGGAGCGGATCCCCGGGAAAGTCATCTTCGAGA
CGCAGTCGACGCATAAGATGCTGGCCGCGCTGTCGCAGGCCTCGCTGATCCACATTAAAGGCAACTATGATGAAGAGACC
TTTAACGAAGCCTTTATGATGCATACCTCTACGTCGCCGAGCTACCCCATCGTCGCGTCGATTGAGACCGCGGCGGCGAT
GCTGCGCGGCAACTCCGGTAAACGTCTGATCCAGCGCTCCATTGAGCGGGCGCTGGACTTCCGCAAAGAGGTGCAGCGAC
TGCGCGAGGAGTCGGACGGCTGGTTCTTTGATATCTGGCAGCCGGAAGCCGTGGATAAAGCCGAGTGCTGGCCGGTAGCG
CCGGGCGAGGACTGGCACGGTTTCAAAGATGCCGATGCGGATCATATGTATCTCGATCCGGTGAAGGTCACCATTCTGAC
GCCGGGCATGGACGAGCAGGGGAATATGGATGAAGAGGGGATCCCGGCGGCGCTGGTGGCGAAGTTCCTCGACGAGCGGG
GCGTGGTGGTAGAGAAAACAGGCCCCTACAATCTGCTGTTCCTGTTCAGTATCGGCATCGATAAAACCCGGGCGATGGGG
CTGCTGCGCGGCCTGACCGAGTTTAAACGCGCCTACGATCTCAATCTGCGGGTGAAAAATATGCTGCCGGATCTGTACGC
CGAAGATCCCGACTTCTACCGCAACATGCGGATCCAGGATCTGGCGCAGGGGATCCACCGCTTGATCCGTCAGCATCAGC
TGCCGCAGCTGATGCTCAGCGCCTTTGACGTCCTGCCGGAAATGAAAATGACGCCGCATCACGCCTGGCAGCGCCAGATC
AAGGGGGAGGTGGAAACTATTGAACTGGAGAACCTGGTGGGGCGGATTTCGGCCAACATGATCCTCCCTTATCCGCCGGG
GGTTCCGCTGCTGATGCCGGGAGAGATGATCACCGAGGAAAGCCGGGCGGTGCTCGATTTTCTGCTGATGCTTTGCTCTA
TCGGCCGTCATTACCCGGGCTTTGAGACCGATATTCACGGCGCCAAGCGCGATGAGGACGGTGTGTATCGGGTACGAGTC
TTAAAAAATGACGAAAGGCTTGCGCGTTAA

Protein sequence :
MMLDLGEYQEESVNIIAIMGPHGVYHKDEPIKELEAALQRQGFQTIWPQNSADLLQFIEHNPRICGVIFDWDEYSVDLCS
DINQLNEYLPLYAFINAHSTMDVSSQDLRMTLWFFEYALGLSEEIATRIGQYTREYLENITPPFTRALFNYVQEGKYTFC
TPGHMGGSAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARAFGAEQSYMVTNGTSTSNKIVG
MYSAPAGSTLLIDRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPRREFTRDSIQQKVRDTGGAQWPVHAVITNSTY
DGLLYNTTWLKETLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERIPGKVIFETQSTHKMLAALSQASLIHIKGNYDEET
FNEAFMMHTSTSPSYPIVASIETAAAMLRGNSGKRLIQRSIERALDFRKEVQRLREESDGWFFDIWQPEAVDKAECWPVA
PGEDWHGFKDADADHMYLDPVKVTILTPGMDEQGNMDEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMG
LLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHRLIRQHQLPQLMLSAFDVLPEMKMTPHHAWQRQI
KGEVETIELENLVGRISANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIGRHYPGFETDIHGAKRDEDGVYRVRV
LKNDERLAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 69
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_4214 YP_008427118.1 lysine decarboxylase 2, constitutive VFG1670 Protein 0.0 63