Gene Information

Name : N559_1154 (N559_1154)
Accession : YP_008424203.1
Strain : Klebsiella pneumoniae JM45
Genome accession: NC_022082
Putative virulence/resistance : Virulence
Product : iron transport system inner membrane permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1154243 - 1155091 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCTGGCTGCTGGAGCCGTTTGGCTATTACTATATGCTCAATGCGATGTGGGTGTCGGCGCTGGTGGGCGGCGTCTG
CGCCTTTCTCTCCTGCTACCTGATGCTCAAAGGCTGGTCGCTGATTGGCGACGCCCTCTCCCACTCGATTGTACCCGGCG
TCGCCGGGGCCTATATGCTCGGCCTGCCCTTCGCGCTCGGCGCGTTTCTCTCCGGCGGCCTGGCGGCGGGCAGCATGCTG
TTTTTGCAACAGCGCTCGCGGCTAAAAGAGGATGCCATTATCGGGCTGATCTTCTCCTCCTTCTTCGGGATCGGGCTGTT
TATGGTGTCGCTGAATCCGACGTCGGTGAATATCCAGACCATCATCCTCGGCAATATTCTGGCCATCGCCCCGGAGGATA
TTATCCAGCTGGCGGCGATCGGCTTTATCTCAATGGCGATTCTGCTGCTGAAGTGGAAAGACCTGATGGTGACCTTCTTT
GATGAACACCACGCCCGCTCGATTGGCCTGAACACCCGCGGCCTGAAGCTGCTGTTCTTTACCCTGCTGGCCGCCTGCAC
CGTGGCGGCGCTGCAGACCGTCGGCGCCTTTCTGGTCATCTGCCTGGTGGTCACTCCCGGGGCCACCGCGTGGCTGTTAA
CCGATCGCTTCCCGCGCCTGCTGGCCATCGCCGTGGCTATCGGCAGCCTGACCAGTTTCTTCGGCGCCTGGCTCAGCTAC
TATCTCGACGGCGCCACCGGCGGCATTATCGTGGTCGCGCAAACGCTGCTGTTCCTCATCACCTTTATCTTCGCGCCGAA
GCACGGCCTGCTGGCCAGCCGCCGCCGCGCCAGGGAGGCCGCATGCTGA

Protein sequence : 
MSWLLEPFGYYYMLNAMWVSALVGGVCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFALGAFLSGGLAAGSML
FLQQRSRLKEDAIIGLIFSSFFGIGLFMVSLNPTSVNIQTIILGNILAIAPEDIIQLAAIGFISMAILLLKWKDLMVTFF
DEHHARSIGLNTRGLKLLFFTLLAACTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLAIAVAIGSLTSFFGAWLSY
YLDGATGGIIVVAQTLLFLITFIFAPKHGLLASRRRAREAAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-82 88
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-82 88
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-82 88
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-82 88
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-82 88
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-34 44
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-34 44
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-34 44
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 8e-35 44
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-34 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_1154 YP_008424203.1 iron transport system inner membrane permease component BAC0351 Protein 1e-82 88
N559_1154 YP_008424203.1 iron transport system inner membrane permease component BAC0441 Protein 3e-65 70
N559_1154 YP_008424203.1 iron transport system inner membrane permease component BAC0352 Protein 5e-35 44
N559_1154 YP_008424203.1 iron transport system inner membrane permease component BAC0442 Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_1154 YP_008424203.1 iron transport system inner membrane permease component VFG0527 Protein 1e-82 88
N559_1154 YP_008424203.1 iron transport system inner membrane permease component VFG0528 Protein 5e-35 44