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Name : lysS (BASU_0086) Accession : YP_008419540.1 Strain : Bacillus amyloliquefaciens UCMB5113 Genome accession: NC_022081 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 89388 - 90887 bp Length : 1500 bp Strand : + Note : Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; PubMedId:12682299, 14623972, 20649968; Product type e:enzyme DNA sequence : ATGAGTCAAGAAGAGCAAAATCATGAGGAATTGAACGACCAGCTGCAAGTCAGACGAGATAAAATGAACCAGCTGAGAGA AAACGGCATTGACCCTTTCGGCGAACGTTTCGAGAGAACGCATCAATCTCAACAGATCATTGACGCCTACCAGGAGCTTT CTAAAGAAGAACTGGAAGAAAAAGCGGTCGAAGTGACCATTGCAGGCCGTATGATGACAAAGCGCGGAAAAGGGAAAGCC GGCTTTGCGCATCTGCAGGACTTAGAAGGTCAAATTCAAATTTACGTAAGAAAAGACAGTGTCGGCGAAGAACAATATGA AATCTTTAAATCTTCAGACCTCGGAGACGTTATCGGCATCACGGGGAAAGTTTTCAAAACAAACGTAGGCGAGCTTTCTG TCAAAGCGACATCTTTTGAACTGCTGACAAAAGCACTGCGTCCTCTTCCTGATAAATATCATGGGTTAAAAGACGTTGAA CAGCGTTACCGCCAGCGCTATCTCGATCTCATCGTAAACCCTGACAGCAAACAAACGTTTATCACACGCAGCAAAATCAT CCAAGCGATGAGAAGATACTTAGATGACCATGGATACTTAGAAGTTGAAACACCTACGATGCACAGCATACCGGGAGGAG CGTCTGCACGCCCGTTCATCACGCACCATAACGCACTCGACATGCCTCTTTATATGCGTATTGCGATTGAACTGCACCTG AAACGCCTGATTGTCGGCGGATTGGAAAAAGTCTACGAAATCGGCCGCGTGTTCCGTAACGAAGGTGTTTCTACACGCCA CAACCCTGAATTCACGATGATCGAGCTGTATGAAGCGTACGCCGATTATAAAGATATTATGAGCCTTACGGAAAATCTCG TTGCACATATTGCGCAGGAAGTGCTTGGAAGCACCACAATCCAGTACGGCGAAGAGCAGATTGATCTGAAACCTGAGTGG AAACGACTCCACATGGTAGATGCGGTCAAAGAAGCGACAGGTGTAGATTTCTGGAATGAGATGACTGTTGAAGAAGCGCG CGGTCATGCAAAAGAGCATGGTATCGAGATCACAAACTCAATGACGGTGGGTCATATCATCAATGAATTCTTCGAACAAA AAATTGAAGAAACACTCATTCAGCCTACATTTATTTACGGCCACCCTGTAGAGATTTCTCCTCTTGCTAAGAAAAATCCC GAGGACCCTCGCTTTACAGACCGTTTTGAGCTGTTTATCGTCGGCCGTGAGCACGCTAATGCGTTTACGGAGCTGAATGA CCCTATTGACCAGAGGGAACGCTTTGAAGCGCAGTTAAAAGAAAGAGAAGAAGGAAACGATGAAGCGCATATGATGGATG AAGACTTCGTTGAAGCTCTTGAATACGGCATGCCGCCGACCGGGGGATTGGGTATCGGTATCGACCGCCTTGTCATGCTG TTAACAAATGCTCCGTCTATCAGAGACGTTTTATTATTCCCTCAAATGAGACAACGCTAA Protein sequence : MSQEEQNHEELNDQLQVRRDKMNQLRENGIDPFGERFERTHQSQQIIDAYQELSKEELEEKAVEVTIAGRMMTKRGKGKA GFAHLQDLEGQIQIYVRKDSVGEEQYEIFKSSDLGDVIGITGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVE QRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHL KRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQIDLKPEW KRLHMVDAVKEATGVDFWNEMTVEEARGHAKEHGIEITNSMTVGHIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNP EDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVML LTNAPSIRDVLLFPQMRQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-127 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008419540.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-128 | 53 |
