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Name : ydfA (BASU_3494) Accession : YP_008422896.1 Strain : Bacillus amyloliquefaciens UCMB5113 Genome accession: NC_022081 Putative virulence/resistance : Resistance Product : Arsenical pump membrane protein (arsB like) Function : - COG functional category : - COG ID : - EC number : - Position : 3667248 - 3668546 bp Length : 1299 bp Strand : + Note : Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId:1534328; Product type t:transporter DNA sequence : TTGGGAGTTGCGGTTTTATCAGCGCTGATTTTTGTGCTGACACTTGTGTTTGTCATATGGCAGCCGAAACATGTATCAAT CGGCTGGTCTGCCTGCGGCGGGGCGGTCCTCGCTTTGATCGCCGGAGCAGTCAGCCTGCACGATATCGCGGAAGTGACGG GAATCGTCTGGAATGCGACACTTGCCTTTATCGCCATTATCATCATTTCATTGATTCTTGACAGTATCGGTTTTTTCGAG TGGGCCGCGCTGCATATGGCCATGGCGGCCAAAGGCAGCGGGCTGCGGATGTTTCTCTATGTGTCGGTCTTAGGGGCTGT AGTCTCCGCCCTGTTTGCCAATGACGGAGCGGCGCTCATTTTGACGCCGATCGTACTGGCGATGGTGCGGGCTTTGAATT TACCTGAAAAGCTGATTTTTCCGTTTATTATCGCCGGAGGATTCATAGCCGACACCACCTCGCTTCCGCTCGTTGTAAGC AATTTGGTCAATATTGTATCCGCCGATTACTTTCATATCGGGTACATTGAATATGCATCACGCATGCTGGTGCCCAACCT TTTTTCTCTGGCGGCAAGCATTTTGGTGCTGTATCTCTATTTCAGAAAAAACATTCCGAAACGGTATGACACCGGTCTTG TGAAACATCCGGCATCCGCGATTAAGGATGAACGCCTTTTCCGGTTATCGTGGGCTGTGCTGGCCGTTTTATTGATCGGA TATTTCGTCAGCGAACTGCTGTCGATACCCGTTTCCTTCGTTGCCGGCTCCATCGCGGTCATTTTTCTCATTCTGGCCCA GCGAAGCCCCGCCGTCCCTGCGAAACAAGTCATCAAGGACGCCCCGTGGGCCATCGTGTTTTTTTCTGTCGGCATGTATG TTGTCGTGTACGGCTTGCGGAATGCCGGACTGACGGATCTTCTTTCTCAGCTTATACAGAAAGCGGCGGATCACGGTTTG TTTGCGGGCACACTCGGAATGGGGTTTATCGCGGCGATCCTCTCCTCCGTTATGAATAACCTGCCGACGGTGATGATTGA CGCCATAGCCATCAGCGGAACGGACACTCACGGGCTGATGAGAGAAGCATTGATTTACGCGAATGTTATCGGTTCGGACC TCGGGCCGAAAATCACGCCGATCGGGTCGCTGGCGACGTTGTTATGGCTCCACGTGCTGAGCCGGAAAAACGTGAAAATT TCCTGGGGAATGTATTTCAAGACAGGTCTGATATTAACCATTCCGACGTTATTCATCACCTTGATCGGACTTTATTTATG GCTGTTATGGCTCGCTTGA Protein sequence : MGVAVLSALIFVLTLVFVIWQPKHVSIGWSACGGAVLALIAGAVSLHDIAEVTGIVWNATLAFIAIIIISLILDSIGFFE WAALHMAMAAKGSGLRMFLYVSVLGAVVSALFANDGAALILTPIVLAMVRALNLPEKLIFPFIIAGGFIADTTSLPLVVS NLVNIVSADYFHIGYIEYASRMLVPNLFSLAASILVLYLYFRKNIPKRYDTGLVKHPASAIKDERLFRLSWAVLAVLLIG YFVSELLSIPVSFVAGSIAVIFLILAQRSPAVPAKQVIKDAPWAIVFFSVGMYVVVYGLRNAGLTDLLSQLIQKAADHGL FAGTLGMGFIAAILSSVMNNLPTVMIDAIAISGTDTHGLMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSRKNVKI SWGMYFKTGLILTIPTLFITLIGLYLWLLWLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 5e-110 | 68 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 3e-105 | 66 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-112 | 66 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 1e-89 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ydfA | YP_008422896.1 | Arsenical pump membrane protein (arsB like) | BAC0574 | Protein | 4e-109 | 68 |
| ydfA | YP_008422896.1 | Arsenical pump membrane protein (arsB like) | BAC0575 | Protein | 3e-112 | 67 |
| ydfA | YP_008422896.1 | Arsenical pump membrane protein (arsB like) | BAC0578 | Protein | 5e-90 | 60 |
| ydfA | YP_008422896.1 | Arsenical pump membrane protein (arsB like) | BAC0576 | Protein | 2e-89 | 60 |
| ydfA | YP_008422896.1 | Arsenical pump membrane protein (arsB like) | BAC0577 | Protein | 3e-90 | 59 |
| ydfA | YP_008422896.1 | Arsenical pump membrane protein (arsB like) | BAC0031 | Protein | 4e-85 | 58 |
