Gene Information

Name : BASU_3366 (BASU_3366)
Accession : YP_008422771.1
Strain : Bacillus amyloliquefaciens UCMB5113
Genome accession: NC_022081
Putative virulence/resistance : Virulence
Product : Putative transcription regulator HTH, Cro/C1-type DNA-binding
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3553312 - 3553515 bp
Length : 204 bp
Strand : +
Note : Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr:putative regulator

DNA sequence :
GTGGATAACAATATTAAAAAACTTAGAACAGCAGCTGATATTTCACAAAATGATCTGGCTAAGCTCTGCAATGTGACCAG
GCAAACCATCAATGCAATTGAAAATAATAAATATGATCCAACTTTAAGTCTGGCTTTTTCGATAGCTCACGCATTAAATA
CGGGAATAGATAAAGTATTCAACTATAACGCCAAAAAAAAGTAA

Protein sequence :
MDNNIKKLRTAADISQNDLAKLCNVTRQTINAIENNKYDPTLSLAFSIAHALNTGIDKVFNYNAKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-09 55
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-09 49
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-09 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BASU_3366 YP_008422771.1 Putative transcription regulator HTH, Cro/C1-type DNA-binding VFG2168 Protein 1e-09 49
BASU_3366 YP_008422771.1 Putative transcription regulator HTH, Cro/C1-type DNA-binding VFG2175 Protein 1e-09 49