Gene Information

Name : spaF (BASU_3017)
Accession : YP_008422425.1
Strain : Bacillus amyloliquefaciens UCMB5113
Genome accession: NC_022081
Putative virulence/resistance : Virulence
Product : SpaF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3204447 - 3205160 bp
Length : 714 bp
Strand : -
Note : Evidence 1b:Function experimentally demonstrated in the studied species; PubMedId:17704766; Product type e:enzyme

DNA sequence :
ATGAGCAATATCATAGAAACGAGACAGCTGCAAAAATCATTCGGCAGACAACAGGCAGTGGCTGATGTGTCTCTATCAGT
AAAACGCAACAGTATATACGGCCTGCTCGGTCCGAACGGCGCGGGAAAATCAACGACACTTAAAATATTGACCGGCATGC
TGCAGCAAACATCCGGCGAGGTTCTGTTCGACGGACATACATGGAAGCGCGAAGATTTGAAAAGCATCGGTTCCCTGATT
GAAGCGCCGCCGCTTTACAGCAACCTGACAGCCGCTGAAAATCTGAAAGTCCGCTGCGTGATGCTCGGACTGCCTGATTC
AAGAATTGCGGAAGTGCTGGAAATCACGGGATTAACGGGAACTGGAAAAAAGCGCGCCGGACAATTTTCTATGGGAATGA
AGCAGCGTCTCGGCATTGCGTTAGCATTATTAAACCGTCCGTCGCTCTTAATTCTTGATGAGCCGACAAACGGATTGGAC
CCGATGGGAATTCAGGATTTGCGGGAATTTATCCGCTCTCTGCCCGGACAGGGAATGACGGTTATTTTATCTAGTCACCT
GTTATCAGAAGTCGAGCAGATCGCAGACCATATCGGAATCATCAGTGACGGCGTTTTAGGATATCAGGGAGAAATCAGCC
GGGAAGACGATCTGGAGCGGCTGTTTCTGGAGGTAGTCAAATCAACACGGGAGAAAGCGGGGACAGGGAAATGA

Protein sequence :
MSNIIETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGMLQQTSGEVLFDGHTWKREDLKSIGSLI
EAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEITGLTGTGKKRAGQFSMGMKQRLGIALALLNRPSLLILDEPTNGLD
PMGIQDLREFIRSLPGQGMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEISREDDLERLFLEVVKSTREKAGTGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-46 50
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 1e-43 49
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 3e-44 47
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 3e-44 47
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 3e-44 47
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 3e-44 47
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 1e-40 47
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 1e-40 47
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 3e-30 44
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 1e-31 43
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-39 42
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-39 42