Gene Information

Name : polA (BASU_2556)
Accession : YP_008421974.1
Strain : Bacillus amyloliquefaciens UCMB5113
Genome accession: NC_022081
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.7
Position : 2746073 - 2748712 bp
Length : 2640 bp
Strand : -
Note : Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; PubMedId:3125407, 6777244, 9231429; Product type e:enzyme

DNA sequence :
ATGACGGAACGAAAAAAATTAGTGCTTGTCGACGGAAACAGTCTGGCGTACCGGGCGTTTTTTGCATTGCCGCTTTTAAG
CAATGAAAAAGGCATCCATACAAATGCCGTATACGGGTTTGCGATGATTTTAATGAAAATGCTGGAAGATGAAAAGCCAA
CCCACATGCTGGTGGCTTTTGATGCGGGAAAAACCACTTTCCGCCACAGCACGTTTAAAGAATATAAAGGCGGAAGACAA
AAAACGCCGCCGGAGCTTTCAGAACAGATGCCGTTCATCCGCGAGCTCCTTGATGCCTATAACATCAGCCGCTACGAGCT
TCCTGAATATGAAGCGGACGATATTATCGGCACCCTTGCCGTATCTGCTGAAAAAGAAGGCTTCGAAGTAAAGGTAGTTT
CGGGGGACAAGGACTTAACCCAGCTTGCAACCGGGAAAACGACCGTTGCCATTACGAGAAAAGGCATTACCGACGTGGAA
GATTACACGCCGGAGCACGTGCAAGAAAAGTACGGTCTGACCCCTTTGCAAATCATTGATATGAAGGGATTAATGGGGGA
TTCATCCGATAACATACCGGGCGTCCCCGGCGTCGGAGAAAAAACCGCGATTAAGCTTTTAAAGCAGTTCCATTCGGTTG
AGAAACTGCTTGATTCCATTGATGAAGTCAGCGGAAAAAAATTAAAAGAAAAGCTTGAAGAATATAAGGAACAAGCCCTG
ATGAGCAAAGAGCTGGCGACGATTATGACAAATGCGCCGATTGAAGTCAAGCCCGAAGATTTAGATTACCAAGGGTTTGA
CCGTGAACAAGTTGTTGCCATTTTTAAAGACCTGGGTTTTAATACGCTTCTTGAGCGGCTCAGTGAAGAAAGCGGGGAAA
CGGCGGAAGAAAATTTTGAAGACATCAATGTCGAAACGGCAGAAGAAATCACCGAAGATATGCTCGTTTCACCGTCCGCT
TTGGTGGTCGAACAAATCGGTGATAACTATCACGAAGAACCGATCCTCGGCTTTTCCATCGTGAATGAAACAGGTCTTTA
TTATATTCCGAAAGAAATCGCCATTCAGTCTGAAGCTTTTAAATCTTGGGCTGAAGATGAATCGATGAAAAAATGGGTGT
TCGACAGCAAACGTTCCGTCGTCGCTTTGCGCTGGCAGGGAATTGAGCTGAAGGGAACGGAATTTGACGCACTTCTTGCT
GCCTACATTATAAACCCGGGCAATTCGTACGACGATGTCGCGAGCGTAGCGAAAGAATACGGGCTGAATATCGTTTCAAA
AGATGAAGCGGTATACGGAAAAGGCGCAAAGCGCGCCGTTCCGGCTGAAAAAGAGCTTGCCGATCATCTCGCGCGGAAAG
CGTCTGCTGTTAACAGCCTCCGTGACAAACTGCTCGACGCTTTGGAAGAAAATAATCAGCTTGAATTATATGAAGATCTC
GAACTCCCGCTTGCGCTTATTCTCGGAGAAATGGAATCAATGGGCGTCAAAGTGGATGTTGAAAGACTGAAGCGAATGGG
CGAAGAGCTTAAGGCGAAGCTGAAAGAATATGAAGAAAAAATCCATGACATCGCCGGTGAGCCGTTTAACATCAATTCAC
CAAAACAGCTCGGCGTCATTCTGTTTGAAAAGCTCGGCCTGCCGCCAGTAAAGAAAACAAAAACAGGCTATTCCACTTCA
GCTGATGTGCTTGAGAAGCTCGCAGACAAACATGATATCGTCGCGCACATTCTGCAATACAGACAAATCGGCAAGCTTCA
ATCGACTTATATAGAAGGGCTGCTGAAGGTCACGCGCAAGGATTCTCATAAGGTGCATACACGATTCAATCAGGCGTTGA
CTCAAACCGGACGCCTCAGCTCAACGGATCCGAACCTGCAAAATATTCCGATCCGGCTGGAGGAAGGGCGGAAAATCCGT
CAGGCTTTCGTACCGTCCGAACCGGACTGGCTTATTTTCGCCGCCGATTATTCACAAATTGAATTAAGGGTGCTTGCGCA
TATTTCAAAAGATGAAAATCTGATCGAAGCGTTTACGAATGACATGGACATTCACACAAAAACCGCCATGGACGTATTTC
ATGTCAGTGAAGATGAAGTGACACAAGCGATGCGCCGCCAGGCAAAGGCCGTCAATTTCGGCATTGTTTACGGCATCAGT
GATTACGGGCTGTCACAAAACCTCGGCATCACCCGGAAAGAAGCGGGCGCTTTTATAGACCGCTATTTGGAGAGCTTCCC
GGGCGTCAAGGCGTATATGGAAGAGTCGGTGCAGGAAGCGAAGCAAAAAGGATATGTCACGACACTTATGCAGCGCCGCC
GCTATATTCCTGAGCTGACCAGCCGCAACTTCAACCTGCGGAGCTTTGCGGAACGGACGGCCATGAATACGCCGATTCAG
GGAAGCGCCGCCGATATTATTAAAAAAGCCATGATTGACATGGCAGCTGAGCTGAAAGAAAAAAACCTGAAGGCGCGACT
GCTGCTTCAGGTGCACGATGAATTGATTTTTGAAGCGCCTAAGGAAGAAATTGAAATATTAGAGAAGCTGGTTCCTGAAG
TGATGGAGCATGCTTTGGCATTAGACGTGCCGCTGAAGGCGGATTATGCTTCAGGGCCGTCTTGGTACGATGCAAAATAA

Protein sequence :
MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLEDEKPTHMLVAFDAGKTTFRHSTFKEYKGGRQ
KTPPELSEQMPFIRELLDAYNISRYELPEYEADDIIGTLAVSAEKEGFEVKVVSGDKDLTQLATGKTTVAITRKGITDVE
DYTPEHVQEKYGLTPLQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLEEYKEQAL
MSKELATIMTNAPIEVKPEDLDYQGFDREQVVAIFKDLGFNTLLERLSEESGETAEENFEDINVETAEEITEDMLVSPSA
LVVEQIGDNYHEEPILGFSIVNETGLYYIPKEIAIQSEAFKSWAEDESMKKWVFDSKRSVVALRWQGIELKGTEFDALLA
AYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADHLARKASAVNSLRDKLLDALEENNQLELYEDL
ELPLALILGEMESMGVKVDVERLKRMGEELKAKLKEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLPPVKKTKTGYSTS
ADVLEKLADKHDIVAHILQYRQIGKLQSTYIEGLLKVTRKDSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIR
QAFVPSEPDWLIFAADYSQIELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSFAERTAMNTPIQ
GSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAPKEEIEILEKLVPEVMEHALALDVPLKADYASGPSWYDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 50