Gene Information

Name : yocR (BASU_1859)
Accession : YP_008421282.1
Strain : Bacillus amyloliquefaciens UCMB5113
Genome accession: NC_022081
Putative virulence/resistance : Unknown
Product : putative sodium-dependent transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2027718 - 2029055 bp
Length : 1338 bp
Strand : -
Note : Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId:15849754, 16850406; Product type pt:putative transporter

DNA sequence :
GTGAAAGAAGCTAATCAATGGTCATCTAAGCTGGGATTTATTTTAGCTACGGCCGGCTCTGCAATCGGGCTCGGCGCAAT
ATGGAAGTTCCCTTACGTAGCGGGAACCAGCGGAGGCGGCGCTTTTCTGCTTGTTTTTATTTTATTTACTGTTTTAATCG
GACTGCCGCTTTTGCTTGCTGAATTTATTATCGGCAGAAAAACACAAAAAAACGCCGTTGAATCCTATAAGGCGCTCGCG
CCGGGGAAAAAGTGGCACTGGATCGGATATCTCGGAATCATTACGTGTTTTATTCTATTATCCTTCTACAGCGTAGTGGG
GGGATGGATATTAATCTACATTATAAAAGGCTTTACAGGCGGCTTATCGCTTTCTTCGGGATTTGATACGTTATTTATCG
ATACCATTTCAAATCCTTATGCAGCCGTTTTCGGCCAGCTGCTGTTTATCGTGCTGACGATTTTAGTTGTGGCAAAAGGG
GTGAGCAGCGGAATCGAAAAGGTAAGCCAGGTGCTGATGCCGGCTCTGTTTATTCTGTTTATTCTCTTAATGATCCGCTC
CGTTACGCTGCATGATGCAGCAAAAGGATTAAAATTCTTTTTTATGCCTGATTTTGGCGCGATGGATGCCAATACCATTT
TATATGCGATGGGACAATCATTTTTCTCGTTAAGCGTCGGAGTGTCCGTAATGGTTACATACAGCGCATATTTAGAAAAA
GAAGAAAATATTGTTCAATCCGCCGTATCGGTGACGGTATTAAATGTCCTTGTTGCTGTGATGGCGGGAGTGGCGATTTT
TCCGGCGGTGTTTGCATTCGGCCTCAAGCCGGATCAAGGCCCGCAGCTTTTATTTAACGTGCTGCCGACCGTCTTTAACC
AAATGCCGTTGGGCATCGTGTTTTTACTCGCCTTTTTGCTGCTGTTTTTATTTGCGACGCTGACATCGGCTTTTTCAATG
CTTGAAATTTTAGTTGCTGTTTTGTCAAAAGGCGATTCGGCAAAACGGAAGCGGTATGCATGGATCGGGGGACTTGCTAT
ATTTATTGTCGGGGTCCCTTCGGCGCTGTCGTACGGAATTTTGAGTGATGTTTCTATTTTTCACCGCAGTATTTTTGACG
CTGCGGATTTTCTGGTCAGCAATGTCTTAATGCCGCTGGGCGCGCTTTTAATTGCCGTTTTCGTACCGCTGAAAATTCCG
AAACAGATGCTGTTTGACGAACTGAAAAGCGGTTCCGGTATAAAACGAAAATGGTTTGCAGTCTGGCTCCTATTAATCCG
TTATGTGGCTCCTGTAGCCATTATTATCGTTTTTCTGCACGTCCTTGGTATTTTTTAA

Protein sequence :
MKEANQWSSKLGFILATAGSAIGLGAIWKFPYVAGTSGGGAFLLVFILFTVLIGLPLLLAEFIIGRKTQKNAVESYKALA
PGKKWHWIGYLGIITCFILLSFYSVVGGWILIYIIKGFTGGLSLSSGFDTLFIDTISNPYAAVFGQLLFIVLTILVVAKG
VSSGIEKVSQVLMPALFILFILLMIRSVTLHDAAKGLKFFFMPDFGAMDANTILYAMGQSFFSLSVGVSVMVTYSAYLEK
EENIVQSAVSVTVLNVLVAVMAGVAIFPAVFAFGLKPDQGPQLLFNVLPTVFNQMPLGIVFLLAFLLLFLFATLTSAFSM
LEILVAVLSKGDSAKRKRYAWIGGLAIFIVGVPSALSYGILSDVSIFHRSIFDAADFLVSNVLMPLGALLIAVFVPLKIP
KQMLFDELKSGSGIKRKWFAVWLLLIRYVAPVAIIIVFLHVLGIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0458 YP_039907.1 sodium:neurotransmitter symporter family protein Not tested vSa¥á Protein 9e-70 48
SAS0416 YP_042543.1 sodium:neurotransmitter symporter family protein Not tested vSa¥á Protein 9e-70 48