Gene Information

Name : nrdE (BASU_1681)
Accession : YP_008421106.1
Strain : Bacillus amyloliquefaciens UCMB5113
Genome accession: NC_022081
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase (major subunit)
Function : -
COG functional category : -
COG ID : -
EC number : 1.17.4.1
Position : 1786054 - 1788156 bp
Length : 2103 bp
Strand : +
Note : Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; PubMedId:12682299, 15937154, 16885274, 17395719, 21561096; Product type e:enzyme

DNA sequence :
TTGTCACAAAATCAAGTGCCAAAATGGATCCAGTTAAATAACGAAATCATGATCCAACAAGATGGAAAATTCCAGTTTGA
TAAAGATAAAGAGGCTGTACATAGCTATTTTGTTGACTATATCAATCAAAACACAGTTTACTTTCACGATTTGAAAGAGA
AGCTGGATTATTTGATTGAAAACCAATACTACGAAGAGGAATTCTTAAGCCTTTACTCTTTTGAAGACATTAAAGAAGTG
TTTAAGACAGCTTACGCAAAGAAGTTTCGTTTTCCTTCCTTCATGAGTGCGTTTAAATTTTATAATGACTATGCTTTGAA
AACGAATGACAAGAAAAGAATCCTCGAGCGTTATGAGGACCGAATCTCAATCGTCGCGCTGTTCTTCGCAAACGGCGACA
CTGAGAAAGCAAAAGAATATGTAAACCTGATGATCAACCAGGAATATCAGCCGAGTACACCGACATTTTTGAATGCCGGC
AGAAAACGCCGCGGAGAACTGGTGAGCTGCTTCTTGCTCGAAGTCAATGATTCCTTAAACGATATTTCACGGGCGATCGA
TATTTCCATGCAGCTGTCTAAATTGGGCGGAGGGGTTTCTCTTAATCTGTCCAAGCTTCGCGCGAAAGGCGAAGCGATTA
AAGATGTTGAAAACGCCACAAAAGGTGTTGTAGGCGTCATGAAGCTTCTTGATAATGCGTTCCGTTACGCTGACCAAATG
GGCCAAAGACAAGGCTCAGGCGCGGCGTATTTAAATATCTTCCACCGCGATATCAATGATTTTCTTGATACGAAAAAGAT
TTCTGCGGATGAAGATGTGCGCGTCAAAACGCTTTCTATCGGTGTCGTCATTCCGGATAAGTTCGTTGAGCTTGCGCGTG
AGGATAAAGCGGCTTATGTATTCTATCCGCATACGATTTATAAAGAATACGGCCAGCATATGGACGAAATGGACATGACG
GCGATGTATGAGGAGCTTGTCGACAACCCGCATGTCAAAAAAGAAAAAGTGAATGCGCGCAAATTGCTTGAAAAGCTTGC
CGTTCTCCGTTCTGAGTCAGGTTATCCGTACATTATGTTCCAGGACAACGTAAACAAAGAGCACGCGAATAACCACGTAT
CAAAGGTGAAATTCTCGAACCTTTGCTCTGAAGTGCTTCAGGCGTCACAGGTTTCGGCTTACACAGATTATGATGAAGAA
GACGAAATCGGCTTGGACATTTCCTGCAACCTTGGTTCATTAAATATTTTGAATGTCATGAAACATAAATCGATTGAGCG
CACGGTGAAACTCGCGACGGATTCCCTGACTCATGTATCTGAGACGACGGATATCCGCAACGCGCCGGCAGTCAGACGCG
CGAACAAAGCGATGAAGTCCATCGGTTTAGGCGCCATGAACCTTCATGGCTACCTGGCCCAAAACGGCATCGCGTATGAA
AGCCCGGAAGCAAGAGATTTCGCGAATACGTTCTTTATGATGGTGAACTTTTATTCCATCCAGCGTTCAGCTGAGCTTGC
GAAAGAAAAAGGCGAAACGTTTGAGCATTATGAAGGCTCCACTTATGCAACGGGAGAATATTTCAATAAATACATCGAAA
AAGAGTTCTCACCGGCATACGAAAAAATCGCTGCGCTCTTTGAAGGCATGCATATTCCGACAATCGAAGACTGGAAAGAG
CTGAAGGCGTTTGTCGCCGAAAACGGCATGTACCACAGCTACAGACTGTGCATCGCGCCGACAGGTTCCATTTCCTACGT
CCAATCCAGCACGGCGTCCGTTATGCCGATCATGGAACGGATCGAAGAAAGAACATACGGAAATTCAAAAACGTATTACC
CGATGCCGGGATTAGCGTCTAATAACTGGTTCTTCTACAAAGAAGCTTATGATATGGACATGTTCAAAGTGGTGGATATG
ATCGCGACAATCCAGCAGCATATCGATCAGGGAATCAGCTTTACCCTGTTTTTGAAAGATACGATGACAACTCGTGATCT
GAACCGTATTGATCTGTATGCCCACCATAGAGGCATCAAAACCATTTACTATGCAAGAACGAAAGATACCGGGCAGGACA
GCTGTCTTTCTTGTGTCGTTTGA

Protein sequence :
MSQNQVPKWIQLNNEIMIQQDGKFQFDKDKEAVHSYFVDYINQNTVYFHDLKEKLDYLIENQYYEEEFLSLYSFEDIKEV
FKTAYAKKFRFPSFMSAFKFYNDYALKTNDKKRILERYEDRISIVALFFANGDTEKAKEYVNLMINQEYQPSTPTFLNAG
RKRRGELVSCFLLEVNDSLNDISRAIDISMQLSKLGGGVSLNLSKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQM
GQRQGSGAAYLNIFHRDINDFLDTKKISADEDVRVKTLSIGVVIPDKFVELAREDKAAYVFYPHTIYKEYGQHMDEMDMT
AMYEELVDNPHVKKEKVNARKLLEKLAVLRSESGYPYIMFQDNVNKEHANNHVSKVKFSNLCSEVLQASQVSAYTDYDEE
DEIGLDISCNLGSLNILNVMKHKSIERTVKLATDSLTHVSETTDIRNAPAVRRANKAMKSIGLGAMNLHGYLAQNGIAYE
SPEARDFANTFFMMVNFYSIQRSAELAKEKGETFEHYEGSTYATGEYFNKYIEKEFSPAYEKIAALFEGMHIPTIEDWKE
LKAFVAENGMYHSYRLCIAPTGSISYVQSSTASVMPIMERIEERTYGNSKTYYPMPGLASNNWFFYKEAYDMDMFKVVDM
IATIQQHIDQGISFTLFLKDTMTTRDLNRIDLYAHHRGIKTIYYARTKDTGQDSCLSCVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 5e-165 47