Gene Information

Name : M493_04945 (M493_04945)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 868537 - 869265 bp
Length : 729 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACCGCCAATCCATGTATTCAAGTCGAGCGTGTTTCCAAGCGGTTTAGAAAAAAAGTGGTCATCGACGATGTGTCGTT
GGATGTTCGCGCGGGAGAAATTTTCGGTCTGCTCGGCCCGTCGGGAGCCGGCAAGACGACGTTGGTGCGCATGATCGCCG
GCATTGATCAAGCGAGCGAAGGCGCGATTCGTGTGCTGGGCGTGAACATGCCTGATCTTGGCGCCATGAAGCGGATTGGC
TTTATGGCGCAGTCGGATGCCTTGTACGGAGAATTGACCGCGCTCGAGAACATGCAATTTTTTGCTTCGATTTATGGGTT
GCGAGGGAAAAAACAAAAAGAACGGATCGATAACATGCTCGCGCTCGTCAACTTGACGGATGACCGGAAAAAGCCGGTGC
ACCAATACTCGGGCGGGATGAAGCGGCGGCTGTCGCTGGCGATCGCCTTGCTTCATGAACCGAACGTGCTCATTTTGGAT
GAGCCGACGGTCGGCATCGATCCGGTGCTGCGTCAATCGATTTGGGCGGAACTCGAGCGGATTCGCCGGCGCGGCACAAC
CGTTGTCGTCACGACCCATGTGATGGATGAAGCGGAAAAGTGCGGGCGGCTTGGCATGATTCGCGAAGGTCGGTTGATCG
CCGTCGGCCGCCCGGATGAGTTGAAACAAAAAGCAGGCGCGGAAACGATTGAACAAGCGTTTTTGGCGTTTGGAGGTGTC
CGGCGATGA

Protein sequence :
MTANPCIQVERVSKRFRKKVVIDDVSLDVRAGEIFGLLGPSGAGKTTLVRMIAGIDQASEGAIRVLGVNMPDLGAMKRIG
FMAQSDALYGELTALENMQFFASIYGLRGKKQKERIDNMLALVNLTDDRKKPVHQYSGGMKRRLSLAIALLHEPNVLILD
EPTVGIDPVLRQSIWAELERIRRRGTTVVVTTHVMDEAEKCGRLGMIREGRLIAVGRPDELKQKAGAETIEQAFLAFGGV
RR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 1e-50 50
SH0081 YP_251996.1 hypothetical protein Not tested SCCmec Protein 2e-38 49
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 3e-48 47