Gene Information

Name : M493_03850 (M493_03850)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 663491 - 663862 bp
Length : 372 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGGGACGTGGTGATATTTGCGACGTTTACTGTTATGACGAAGAGAAGGTCGCACGGGTTCAACGGAGGCTACATGATGA
ACACATTGCCGCGATTGTGCCGTTTTTCAAGGCGCTTGCCGATGAAAACCGGGCGAAAATTGTATACGCCCTTTGCGAAG
AAGGGGAGCTGTGCGTCTGCGATTTAGCGAACGTCATCGGTGCAACGGTGGCAGCGACGTCGCATCATTTGCGCCTCCTG
TACAAACAAGGAATCGTGAAATATCGGAAAGACGGAAAATTGGCCTTTTACTCGCTCGATGACGATCATATTCGCGAGCT
GTTGCTTGTCGCGCTCGCCCATCAGAAAGAGGGAGATCGCCGTGCGGAGTGA

Protein sequence : 
MGRGDICDVYCYDEEKVARVQRRLHDEHIAAIVPFFKALADENRAKIVYALCEEGELCVCDLANVIGATVAATSHHLRLL
YKQGIVKYRKDGKLAFYSLDDDHIRELLLVALAHQKEGDRRAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 1e-26 51
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 1e-26 51
cadX YP_252015.1 hypothetical protein Not tested SCCmec Protein 3e-18 45
cadX YP_254239.1 cadmium efflux system accessory protein CadX Not tested ¥ðSh1 Protein 2e-21 42
cadC YP_189777.1 CadC family transcriptional regulator Not tested vSe1 Protein 3e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M493_03850 REF_PRJNA208285:M493 ArsR family transcriptional regulator BAC0056 Protein 1e-36 59
M493_03850 REF_PRJNA208285:M493 ArsR family transcriptional regulator BAC0366 Protein 5e-09 44