Gene Information

Name : M493_18255 (M493_18255)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Virulence
Product : PhoP family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3421897 - 3422610 bp
Length : 714 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
TTGCGCCGTCATGTGCAAACGACCTCCCCGGAAGAAGGGGAAAACGAAACAAACGAAATTGTTATCGGTCCGCTTGTCAT
CCGCCCGGACGCGTATGTTGTACAAAAACGGGGGGAGACGATTGAGTTGACCCACCGCGAATTTGAACTGCTCCACTATT
TGGCGAAACATATCGGCCAAGTGATGACGCGTGAACACTTGCTGCAAACGGTCTGGGGCTACGACTATTACGGCGATGTG
CGCACGGTCGATGTGACGGTAAGGCGGCTGCGCGAAAAAATCGAGGACAACCCTTCCCATCCGTCATGGATCGTCACAAG
GCGGGGGGTCGGCTATTATTTGCGCAATCCGGAACAGGAGTCATGAGCCGGCATGAAAAAGGTAGGGCCATTTCGTTCGA
TCCATTTTAAGTTTGTCATTATTTATGTGTTGCTCATTCTCATCGCCATGCAAATTATCGGCGTGTATTTCGTTCGCAAA
CTGGAAACGGAGCTTGTGCAAAACTTCAAAAATTCGTTGAACGAACGGGTGACGCTGCTTGCTTATAACGTTGAGCAGGC
GATGAACCGGGAACGGGATGAGAAAAGCCTGACATTAGAAGAAGACATCCGTTCGCTTCTTCATGATTTCGTTTCCCAAG
ACATTTCCGAAGTGCGCGTCATCGATGAGAAAGGGAAAGTGTTGGCGACATCGAATCCGTACATGCAAAATATC

Protein sequence : 
MEKRILVVDDEKPIADILQFNLQKEGYEVICAYDGEEALQKVEETMPDLILLDIMLPLRDGMEVCREVRKKYDMPIIMLT
AKDSEIDKVLGLELGADDYVTKPFSTRELLARVKANLRRHVQTTSPEEGENETNEIVIGPLVIRPDAYVVQKRGETIELT
HREFELLHYLAKHIGQVMTREHLLQTVWGYDYYGDVRTVDVTVRRLREKIEDNPSHPSWIVTRRGVGYYLRNPEQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-27 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_012469.1.7685629. Protein 8e-56 67
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002951.3237708.p0 Protein 7e-48 55
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_003923.1003749.p0 Protein 6e-48 55
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002758.1121668.p0 Protein 7e-48 55
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_009641.5332272.p0 Protein 7e-48 55
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_013450.8614421.p0 Protein 7e-48 55
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_007793.3914279.p0 Protein 7e-48 55
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002952.2859905.p0 Protein 8e-48 55
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_007622.3794472.p0 Protein 5e-48 55
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002745.1124361.p0 Protein 7e-48 55
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_009782.5559369.p0 Protein 7e-48 55
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator HE999704.1.gene2815. Protein 5e-38 52
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_012469.1.7686381. Protein 7e-36 50
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator AE016830.1.gene1681. Protein 3e-38 47
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator FJ349556.1.orf0.gene Protein 5e-34 47
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator AF155139.2.orf0.gene Protein 2e-30 46
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator AM180355.1.gene1830. Protein 2e-34 45
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator AE000516.2.gene3505. Protein 5e-28 45
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator HE999704.1.gene1528. Protein 1e-24 44
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0125 Protein 2e-23 43
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator DQ212986.1.gene4.p01 Protein 1e-33 43
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP001918.1.gene5135. Protein 7e-28 43
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002758.1121390.p0 Protein 1e-28 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_010079.5776364.p0 Protein 1e-28 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002952.2859858.p0 Protein 1e-28 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_007622.3794948.p0 Protein 1e-28 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_003923.1003417.p0 Protein 1e-28 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_013450.8614146.p0 Protein 1e-28 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002951.3238224.p0 Protein 1e-28 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_007793.3914065.p0 Protein 1e-28 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator AE015929.1.gene1106. Protein 6e-24 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_005054.2598277.p0 Protein 1e-30 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_014475.1.orf0.gen Protein 1e-30 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator AF162694.1.orf4.gene Protein 8e-29 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator AF130997.1.orf0.gene Protein 2e-30 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP000034.1.gene3834. Protein 2e-32 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002695.1.915041.p Protein 2e-32 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP004022.1.gene3215. Protein 6e-32 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator EU250284.1.orf4.gene Protein 4e-32 41
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP001138.1.gene4273. Protein 2e-31 41
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0533 Protein 1e-31 41
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP000647.1.gene4257. Protein 1e-31 41
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0596 Protein 2e-24 41
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002695.1.916589.p Protein 1e-25 41
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0039 Protein 8e-26 41
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP001138.1.gene2239. Protein 2e-24 41
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP000034.1.gene2186. Protein 8e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG1390 Protein 8e-27 43
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG1389 Protein 4e-23 43
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG1702 Protein 1e-27 42
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG1386 Protein 2e-24 41
M493_18255 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG1563 Protein 1e-27 41