Gene Information

Name : M493_18220 (M493_18220)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Unknown
Product : 50S rRNA methyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3415075 - 3415554 bp
Length : 480 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GTGATGGCACGTGCTAACGAGGCGCTGTCGTTTTCGAAAATGACGTTTCCTCATCAGCTCATGCGCCTCATTTTGCTTGA
GCAAATTTACCGCGCGTTTCGGATTAATCGGGGGGAACCGTACCATAAATAAAATTGAAAAGCCTAAGTATTGGAATTCA
ACGGTCTACATGTTTTGATAAGGCACAGTATGGGGCGTCATGGATGGTCCGGTGATGTATGCTGTTTGTCCGATAGAGCG
GGGCGGAAGAAAGGGCGCCTTCTTTTTCATCTGTTGCCGTTTTAACGCCTATTCCCAATCCACCTTTTTTCGATACTTAA
AATATTGCTTGGCGAGTGGATGGCCGGTGTCCCACGGTTTCTTCCGGCCGGTGAAATGGATGATAACCGGCTTTGTGTGC
AGGCGTGGAAGCTTGATATGGCCTGTTGTATAATTCCACTTTGGATGCAAAGGCAGCCATTTGTCATACAAAACGGCATT

Protein sequence :
MHICIAAVGKLKEKYLIQGVNEYTKRLSAYAKIEIIEVADEKTSERASELEEEQVKQREGERLLAKIPHDAYVIALAIEG
KMRSSEQFAARLDELATYGKSKIVFVIGGSLGLSKQVMARANEALSFSKMTFPHQLMRLILLEQIYRAFRINRGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 2e-43 64
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 3e-44 62
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 3e-44 62
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 3e-44 62
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 3e-44 62
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 3e-44 62
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-44 62
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 3e-44 62
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-44 62
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 3e-44 62
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-44 62
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 3e-44 62
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 9e-40 62
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 3e-44 62
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 3e-44 62
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 5e-42 61
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-42 61
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 4e-43 60