Gene Information

Name : M493_17385 (M493_17385)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3247984 - 3248724 bp
Length : 741 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GTGTTCTCCGTCACCGTCCAAGATCCCGATCCGGCCATGGCGGCGAACATCGCCAACAAAACAGCCGAAGTGTTCAAAAA
CGAAATCGTCAAAATCATGAACATCGACAACGTGACGATTCTCTCGAAAGCGGAAGTGAAAGAAAACCAAACCCCAGTCA
AACCGAAGCCATTGCTGAACATGGCCATCGCCTTTGTCGTCGGCCTCATGACCGGCGTCGGGATTGCCTTCCTGCTCGAG
TACTTGGACAACACGATCAAAACCGAAGCTGACGTCGAAAAACATCTCGGCTTGCCGGTGCTCGGGGCAGTAAGCATGAT
GAATCCAAAACAAACGGAAGCAAAAGGGAAGCCATCCGTCATGAAGACAAGAGGTGAAACCATTGGCTCGTAGCAACCGT
CAACAATTCAAACGATTGGAACGAAGCTTAATTACAGCGGAAGATCCAAAATCGCCCGTTGCCGAGCAGTACCGGACGAT
TCGGACGAACATTCAGTTTTCGTTCGTCGATCAGCCGCTTCGTTCGTTTATCGTCACCTCGACGGGCAGCGGCGAAGGAA
AATCGACAACGGCCGCCAACTTAGCTGTCGTGTTCGCCCAACAAGGAAAAAAGACATTGCTCATTGACGCCGACTTGCGC
AAACCGACGGTCCATTACACCTTCCGGTTAAACAACTACATGGGATTAACGAACGTTTTGACGGGCTCGGCGCCGCTGTT
GCCGACGTGCCAGGAGACCGA

Protein sequence :
MEETISLRELFETLRKRLWLIVLITALATVVSGVVSYFLLTPIYQASTQILVNQAKSEQQFYNFNEIQTNVQLINTYSVI
IKSPTILEKVKNELNLDQTLDELNGQIQVSSEKDSQVFSVTVQDPDPAMAANIANKTAEVFKNEIVKIMNIDNVTILSKA
EVKENQTPVKPKPLLNMAIAFVVGLMTGVGIAFLLEYLDNTIKTEADVEKHLGLPVLGAVSMMNPKQTEAKGKPSVMKTR
GETIGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1A AAA64640.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-37 43
SSP0060 YP_300150.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-36 42