Gene Information

Name : M493_17345 (M493_17345)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3239283 - 3241118 bp
Length : 1836 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GGATCGCGGTTTGTCTGGAGAGTGTTCCGCGACCGTTACATAAAACCAAACGCGAATAAACGGCGGACGCTGATTATCGG
AGCGGGATCCGCAGGAATGATGGTCGCGCGGCAGTTAGTGAACAATCCGGATGCGGAACTGAGACCGATTGCCTTTATTG
ACGATGATCTGAACAAGCAAAAACTGCAGTTTTTCAACATTCCGGTTGTCGGAACAACAAAAGACATTGAAGATGTTGTG
CGCGCGTTACGCATTGAGCACATTATTATCGCGATTCCATCGTTAACGAAAAAACAGCTGAACCGGATTTTTGAACAGTG
CGCGAAAACAAACGCAAAAACGCAAATCGTCCCAAAACTTGAGGATATCGTGACAGGAAAAGTGTCCGTGAGCCAATTCC
GCGATGTGCAAGTGGAAGACTTGCTCGGCCGCGAACCGGTCGAACTCGATATCGAAAGCATTTCCAGCTATATCGAAAAC
AAAGTCATTTTAGTCACCGGAGCCGGCGGTTCGATCGGCTCGGAAATTTGCCGGCAAGTATGCCAGTTTAACCCGAAGAA
AATCGTCCTGCTCGGCCACGGCGAAAACAGCATTTATCAAATCGACATGGAACTGCGCAATCAATATAAAGACCAAATCG
ACATTGTCCCAGTGATTGGCGATATTCAAGATCGTGAGCGCATGTTTGAAGTGATGGAAGAACATAAGCCGGATGTCGTC
TACCACGCGGCGGCGCACAAACACGTTCCATTAATGGAATACAACCCGAAAGAAGCGGTCAAAAACAACATTTTCGGCAC
AAAAAACGTCGCCGAAGCGGCCGATACATTTGGTGTCCAAACCTTTGTATTAATTTCGACGGACAAAGCCGTCAATCCAA
CCAATGTGATGGGAGCGACAAAACGCTTTGCGGAAATGATTATTCAACAATTGGACAAGCAGAGTAAAACAAAATTTGTC
GCTGTCCGCTTCGGAAACGTCTTGGGCAGCCGCGGCAGCGTTATTCCGTTATTTAAAAAGCAAATCCAAGCTGGCGGACC
TGTCACCGTCACTCATCCGGATATGACGCGCTATTTTATGACGATTCCGGAAGCATCCCGGCTCGTCATCCAAGCCGGCG
CGCTTGCCAAAGGTGGCGAAATCTTCGTCCTTGACATGGGTGAACCAGTGAAAATCGTCGATCTCGCGAAAAACTTAATC
AAACTATCCGGATATACTGTCGAAGAAATCGGCATCGAATTTACCGGCATCCGCCCGGGTGAAAAAATGTTTGAAGAACT
GCTTAATGAGAATGAAGTGCATCCGGAGCAGGTGTTTCCGAAAATATTTATTGGGAAAGCGACGGCGGTGGACGAAAAAA
TTCTTCACGATTTTATGGATCGATTTGAAGAGATGGATAAAGAAGAGGTTAGAGAGAGATTGTTGGGGATTGCGAATAAT
AAGGAGCTTTCCAAAGTGTCTGTATCTGCTAACACATCAATGAATTAATGTGACAAAACAGAAAAGGGTATTTTCGTATG
GAACCAGTAACTAAAAGGCTATCTCTCAAAAAAAACTTTTTTTGGAATTTTATAGGGAACTTAATTTACGCTTTTGCTCA
ATGGGCAATACTTTCTCTATTAGCTAAGTTAGGTAATCCGCAGATGGTAGGTCAATTTTCCTTAGGGTTAGCAATTACGG
CTCCTATCATTTTGTTCACTAATTTACAGTTGAATTCGATACAAGTTACTGATACTCAACATAAATACAAATTCGGGGAA
TACCTTGGTTTAAGAATTGTTACAAATTTTATAGCTATATTAATTACTATATTGGTAATTCTTCTAGGAAACTATA

Protein sequence :
MAYRKRLTFLMVLDSLIVLTAIYVSLFTLHPGIQIWKYKSVLLSALTLLVSHHFFAFIYRLYQKAWEYASIGELTAIIKA
VTFSIITTAIVQFAVFQDIYVRALMITWMIHIILIGGSRFVWRVFRDRYIKPNANKRRTLIIGAGSAGMMVARQLVNNPD
AELRPIAFIDDDLNKQKLQFFNIPVVGTTKDIEDVVRALRIEHIIIAIPSLTKKQLNRIFEQCAKTNAKTQIVPKLEDIV
TGKVSVSQFRDVQVEDLLGREPVELDIESISSYIENKVILVTGAGGSIGSEICRQVCQFNPKKIVLLGHGENSIYQIDME
LRNQYKDQIDIVPVIGDIQDRERMFEVMEEHKPDVVYHAAAHKHVPLMEYNPKEAVKNNIFGTKNVAEAADTFGVQTFVL
ISTDKAVNPTNVMGATKRFAEMIIQQLDKQSKTKFVAVRFGNVLGSRGSVIPLFKKQIQAGGPVTVTHPDMTRYFMTIPE
ASRLVIQAGALAKGGEIFVLDMGEPVKIVDLAKNLIKLSGYTVEEIGIEFTGIRPGEKMFEELLNENEVHPEQVFPKIFI
GKATAVDEKILHDFMDRFEEMDKEEVRERLLGIANNKELSKVSVSANTSMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 3e-157 57
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-148 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M493_17345 REF_PRJNA208285:M493 hypothetical protein VFG1300 Protein 3e-149 58
M493_17345 REF_PRJNA208285:M493 hypothetical protein VFG0029 Protein 7e-86 42