Gene Information

Name : M493_14170 (M493_14170)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Virulence
Product : PhoP family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2644060 - 2644767 bp
Length : 708 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATTTTGCGCCGCACGGAGCTCGTTCAGCCGGTGGCGGAATCAGGCGAGCGGCTCGTCATCGGCCAGCTCGAAATTTTCCC
GGAGCGCTATGAAGCGGCCGTTGGCGGCAAGCCGCTTGAACTGACACCGAAAGAATTTGAGTTGCTTCTTCACTTGGCGC
GGCATAAAGGGAGGGTGTTGACGCGCGATCAACTGCTCAGCGCGGTATGGAACTACGATTTTGCCGGCGATACACGCATT
GTTGACGTCCATATTAGCCATTTGCGCGAGAAAATCGAGGAAGATACGAAAAAACCGGCGTACATTAAAACGGTGCGCGG
CCTCGGTTACAAATTGGAGGAACCAAAGCGGCATGAATAGCTTCCGCACCCGGTTGCTGTTTTGGCTCGTCACGCTCATT
GTCACCGTCTTGATCGCTCTTGGCTTTTTGCTCGGGCAATTGTTGAAAGATTTTTATGTCGAGACGATGAACAAGCGGAT
GGAAAAGGAGGCAAAAGCGCTCGCCATTTTGCTTGAGAACGAGCCGCTTGAGCGGATTCGCCCCGATTTGCAGGAAATGG
GGAATGAGCTGTCGTCACGCATCACGGTGCTCGACCGGCAGGAGCGGCTGCGGTTTGACAGCGGGCGCATCGCGGCGGTC
AGCGACGAAGACCACGAACGCATCATTCGCACCATTTTGCACAAAAAGCAGTTTCCCCGCTTTTCGGT

Protein sequence : 
MGKKVLVVDDEQPIVTLLSYNLEKAGFQAVVAHDGEEALAKTASEQPALIILDLMLPKLDGVEVCKRLRQQQIMTPILML
TARDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRRTELVQPVAESGERLVIGQLEIFPERYEAAVGGKPLELTPK
EFELLLHLARHKGRVLTRDQLLSAVWNYDFAGDTRIVDVHISHLREKIEEDTKKPAYIKTVRGLGYKLEEPKRHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-41 43
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-40 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-32 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002951.3237708.p0 Protein 2e-76 67
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_003923.1003749.p0 Protein 2e-76 67
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002758.1121668.p0 Protein 2e-76 67
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_009641.5332272.p0 Protein 2e-76 67
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_013450.8614421.p0 Protein 2e-76 67
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_007793.3914279.p0 Protein 2e-76 67
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002745.1124361.p0 Protein 2e-76 67
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_009782.5559369.p0 Protein 2e-76 67
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002952.2859905.p0 Protein 3e-76 67
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_007622.3794472.p0 Protein 2e-76 66
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator HE999704.1.gene2815. Protein 7e-72 63
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator AE016830.1.gene1681. Protein 2e-63 56
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_012469.1.7686381. Protein 2e-63 55
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_012469.1.7685629. Protein 5e-58 54
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0197 Protein 2e-34 46
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator AE000516.2.gene3505. Protein 3e-42 46
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP001918.1.gene5135. Protein 8e-33 46
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP004022.1.gene3215. Protein 1e-39 46
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP000034.1.gene3834. Protein 7e-37 45
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0533 Protein 5e-37 45
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002695.1.915041.p Protein 7e-37 45
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP000647.1.gene4257. Protein 5e-37 45
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP001138.1.gene4273. Protein 2e-37 45
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator AF155139.2.orf0.gene Protein 1e-43 44
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP001485.1.gene721.p Protein 1e-37 44
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0083 Protein 5e-35 43
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator FJ349556.1.orf0.gene Protein 4e-42 43
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0596 Protein 2e-36 43
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0039 Protein 1e-36 43
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002695.1.916589.p Protein 1e-36 43
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP001138.1.gene2239. Protein 2e-36 43
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP000034.1.gene2186. Protein 1e-36 43
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_010410.6002989.p0 Protein 6e-38 42
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_010400.5986590.p0 Protein 3e-38 42
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_011595.7057856.p0 Protein 6e-38 42
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0308 Protein 6e-33 42
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator EU250284.1.orf4.gene Protein 1e-40 42
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator AM180355.1.gene1830. Protein 3e-40 42
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator AF162694.1.orf4.gene Protein 1e-36 42
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP000675.2.gene1535. Protein 2e-39 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator BAC0125 Protein 2e-32 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_010079.5776364.p0 Protein 2e-40 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002952.2859858.p0 Protein 2e-40 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_007622.3794948.p0 Protein 2e-40 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_003923.1003417.p0 Protein 2e-40 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_013450.8614146.p0 Protein 2e-40 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002951.3238224.p0 Protein 2e-40 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_007793.3914065.p0 Protein 2e-40 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_002758.1121390.p0 Protein 2e-40 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_005054.2598277.p0 Protein 8e-41 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator DQ212986.1.gene4.p01 Protein 3e-40 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator NC_014475.1.orf0.gen Protein 8e-41 41
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator CP000034.1.gene3671. Protein 5e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG1389 Protein 2e-36 47
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG1386 Protein 4e-41 45
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG1702 Protein 2e-41 43
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG1390 Protein 2e-38 42
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG1563 Protein 8e-41 42
M493_14170 REF_PRJNA208285:M493 PhoP family transcriptional regulator VFG0596 Protein 2e-32 41