Gene Information

Name : M493_13625 (M493_13625)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2530095 - 2531756 bp
Length : 1662 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
TTGCGCCTGTCGACCGGGTTTCAAATTGAAACGGCGATCGCCTCAAAAGACGACATTTTGCGGGCGATTAACAAGTATTA
CGATATCGATGAGTCGTTTGACGAATTTTTGCAGGCGGCGCCGGAAGTGCGCGAAGACGAGCGGACGGAGGATGACGATT
CGCCCATCGTCCGGCTCGTCAATCAAATTTTGCAGCTGGCGGTCGAACAGCGGGCGAGCGACATTCACATCGATCCGCAA
GAGACGAAAGTGCTCATCCGCTATCGGATCGACGGGTTGCTTCGCACCGAGCGGGCGCTGCCGAAACATATGCAAAGCAT
GTTGACGGCGAGAATTAAAATTTTGGCCAATATGGACATTACCGAACACCGCGTGCCGCAAGACGGGCGGATCAAAATGG
ACATCGATTTTCATCCGGTCGATTTGCGCGTCTCGACATTGCCGACCGTATATGGCGAGAAAATCGTTATGCGCGTTCTT
GATTTAGGTGCGGCGTTAAACGATATTCATAAACTTGGCTTCAATCCGGTCAATTTGGACCGGTTTATCCGCTTGATCGA
GCGGCCGAACGGCATCGTCTTGATCACCGGACCGACCGGTTCGGGGAAATCATCGACGCTTTATGCGGCGCTCAATCATT
TAAACAGCGAGCACGTGAACATTATTACGATTGAAGATCCAGTCGAATATCAGATCGAAGGCGTCAACCAAATTCAAGTG
AACCCGAATGTCGGCTTGACGTTCGCCCAAGGGCTGCGGTCGATTTTGCGCCAAGATCCGAACATCATCATGGTTGGGGA
GATTCGCGACCGCGAGACGGCGGAAGTGGCGATCCGCGCTTCGCTCACCGGCCATTTAGTGTTGAGCACGCTTCATACGA
ACGATGCGTTAAGCACGATCACGCGCCTCGTCGATATGGGCATTGAGCCGTTTTTGGTGGCGACGTCGCTTGCCGGCGTC
GTTTCACAGCGGCTTGTGCGCCGCGTCTGCCGCGATTGCCAAGAGGCGTATGAGCCAACGAAGCGGGAACGGGACATTTT
CGCCCGCCGCGGCATCGACGTTCGCCAACTCGTCCGTGGCCGCGGCTGTCCGACGTGCAACATGACCGGCTACCGCGGAC
GGCTGGCGATTCACGAGCTGCTTGTCGTCACCGAGGAGATGCGGCGCGTCATTTTAAATAACGAGCCGTTTTCAAAACTG
CGCGAGCTCGCCAGTCAAAACAAAATGATTTTTTTGCTGGATGACGGGCTGTTGAAAGTGAAGCAAGGGTTGACGACGCT
TGAAGAAGTGCTAAAAGTGGCCATTTTGCATTGATGGGTGAGACGGATGAAAGAAAAACTTGAGGCGTTATTGCGCGCCG
CGTTTGAATGCCGCGCGTCCGACGTGCATTTGACCGTCGGTGCGCCGCCGATTTTTCGCGTGAACGGGGAGTTGAGAGCA
TACGGCCATGAGCGGCTGCAGCCGGAGGAGACCGAGCAAATGGCGAAAGCTGCCGTCCCGCCGCCGCTTTGGCAGCAGTT
TCAAGAAACCGGAGAGCTTGATTTTTCGTATGGCATTCCCGGTGTTTCCCGCTTTCGCATCAACATCTTTAAACAGCGGT
CATGTGTGTCGCTCGCCGTGCGCCTCATCCCGATGCGCATCCCGACGTTAGAAGAGCTCGCC

Protein sequence :
MSKKQERKRLGDLLVEAGLITESQLAEALREKAPGQKLGDALLQRGYITEQQLIEVLEFQLGIPHVSLYRYPIDPKATSL
VPKEFARRHMVMPLKIEGERLLVAMADPMDFFVIDDLRLSTGFQIETAIASKDDILRAINKYYDIDESFDEFLQAAPEVR
EDERTEDDDSPIVRLVNQILQLAVEQRASDIHIDPQETKVLIRYRIDGLLRTERALPKHMQSMLTARIKILANMDITEHR
VPQDGRIKMDIDFHPVDLRVSTLPTVYGEKIVMRVLDLGAALNDIHKLGFNPVNLDRFIRLIERPNGIVLITGPTGSGKS
STLYAALNHLNSEHVNIITIEDPVEYQIEGVNQIQVNPNVGLTFAQGLRSILRQDPNIIMVGEIRDRETAEVAIRASLTG
HLVLSTLHTNDALSTITRLVDMGIEPFLVATSLAGVVSQRLVRRVCRDCQEAYEPTKRERDIFARRGIDVRQLVRGRGCP
TCNMTGYRGRLAIHELLVVTEEMRRVILNNEPFSKLRELASQNKMIFLLDDGLLKVKQGLTTLEEVLKVAILH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 8e-87 44
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-87 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M493_13625 REF_PRJNA208285:M493 type II secretion system protein E VFG2048 Protein 5e-87 45