Gene Information

Name : M493_11920 (M493_11920)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2227922 - 2228818 bp
Length : 897 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GTCGAAGCGCTCTTATCGGCGCCGCAGACAAATACACCGTTCGGTTTGCGCGATAAGGCGATGCTCGAGCTGCTGTATGC
GACCGGTATGCGCGTCAGCGAACTGGTGCAGCTCAACTTAGGCGACGTGCATTTGACAATGGGGTTTGTTCGCTGCTATG
GGAAAGGGCGAAAAGAGCGGATCGTCCCACTCGGCCGGATGGCGGTTGAAGCGCTTACTGGCTATTTGGAGCACGGGCGT
CCGCAGTTGGCCGATCCGCGCAGGCGGGCGGCGGAGGCGCTATTTTTGAACCATTACGGCCAGCGTCTGACGAGGCAAGG
GTTTTGGAAAATTTTAAAACGGCTTGCCAAAGAAGCGGGCATTGAAAAAGAGCTGACGCCTCACACGCTCCGGCATTCGT
TTGCGACCCATCTGCTTGAGAACGGTGCCGATTTGCGCGCCGTCCAAGAGCTGCTGGGGCATGCCGACATTTCGACGACG
CAAATATATACGCATGTGACGAAAACGCGTCTCAAAGACGTATATAACCAGTATCATCCGCGCGCCTAGCCGCGGCGGCC
GCTGTCCGCTAGGCGCGGTCCTATTGATTTGGTTGTCAGACTTCTGACCAATGCAACAAGGGCGTGTTTTGCCGAAAATA
TGGGAACGATAGGAAGAGACTCTATTTTCACTTCAGGCGGGAGGAATGAAGGTGAAGTCCACATACCGGCGCGTATTTTT
AATTGTGCTCGATTCCGTCGGCATCGGCGAAGCGCCTGATGCTGAGAACTATAACGACAAAGGGGCGGATACGCTCGGGC
ATATCGCCGAATACCGCGGCGGCTTGCACATGCCGAATATGGCCAAACTCGGCCTGAGTCATATTCGTGAGATTCCAGGG
GTGCCGAAAGTGAACGA

Protein sequence :
MEHELKDFLHYLTVERNLAHNTIISYERDLKKYVRYLRQVERLGAWGEVERLHILHFLKFLSEQGQSARTIARHLASIRS
FHQFLLREKMAAQDPAVHIETPQFERTLPKVLSVEEVEALLSAPQTNTPFGLRDKAMLELLYATGMRVSELVQLNLGDVH
LTMGFVRCYGKGRKERIVPLGRMAVEALTGYLEHGRPQLADPRRRAAEALFLNHYGQRLTRQGFWKILKRLAKEAGIEKE
LTPHTLRHSFATHLLENGADLRAVQELLGHADISTTQIYTHVTKTRLKDVYNQYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-57 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-57 45