Gene Information

Name : M493_11090 (M493_11090)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Virulence
Product : PhoB family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2087541 - 2088215 bp
Length : 675 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
TTCCGCCGCGTTCACCCTGAATCGGATGGGCAAGTGTTGGCGTTTAAAGATCTAGTCGTTGACACGCAGGCGCGCACGGT
GAAAAAAGGGGATGAGTTGATCGAGCTGACGAAACGTGAATACGACTTGCTTGTTGCTTTCATGCAAAATATCAACGTCG
TCTTGACGCGCGATGTGCTGCTTGATAAAGTGTGGGGGTTTGACACCGAAGTGGAGACGAACGTTGTGGATGTTTATGTC
CGCTATTTGCGGCAAAAGCTCGATAAGCACGATAAGGAGCGGTATATCCAAACGGTGCGCGGCGCCGGATATGTGATGCG
GCCATGAAGCGCTTCCGCATCCGCAGGCTTTCGCTGAAAGGGAAGCTGACCGTTTTGTCTGCCGGGGCGATTTTTATTAC
GTACTTTGTTTTTACCTTTTTGCAATACCATATTGTCAAGCAATGGCTGCTGAACGAAGAGGAAAAAACAATGGAACAAA
CGGTGGCGGAAATTGAAACATATTACGCAGAAAAACGTAATGTATCATGGGAAGATATTCGCCGCAGCCGTTCGTTTTTG
GAAAAGTTGAATGAGCGCTATCAGCTCATTCGTGTTACCGACCACGACGGAAACGTCGTCGTCTCCGTTTCCAATGGCGC
TGCGGTGTCGCTGTTGCCGGGAGGCGTGCCCGACA

Protein sequence : 
MNGRILLIEDEAGLARFLELDLTHEGFDVHVCSDGREGVELALAEPWDLILLDVMLPRLNGMEVCRRIRAAKSTPIIMIT
ARDSVFDRVMGLDNGADDYIVKPFAIEELFARIRALFRRVHPESDGQVLAFKDLVVDTQARTVKKGDELIELTKREYDLL
VAFMQNINVVLTRDVLLDKVWGFDTEVETNVVDVYVRYLRQKLDKHDKERYIQTVRGAGYVMRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-33 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-35 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-33 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator HE999704.1.gene1528. Protein 4e-70 65
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator AE015929.1.gene1106. Protein 3e-53 55
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator NC_003923.1003417.p0 Protein 3e-56 55
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator NC_013450.8614146.p0 Protein 3e-56 55
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator NC_002951.3238224.p0 Protein 3e-56 55
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator NC_007793.3914065.p0 Protein 3e-56 55
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator NC_002758.1121390.p0 Protein 3e-56 55
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator NC_010079.5776364.p0 Protein 3e-56 55
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator NC_002952.2859858.p0 Protein 3e-56 55
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator NC_007622.3794948.p0 Protein 3e-56 55
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator BAC0125 Protein 3e-36 43
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator BAC0197 Protein 4e-34 43
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator NC_012469.1.7686381. Protein 9e-45 42
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator NC_012469.1.7685629. Protein 7e-39 42
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator BAC0308 Protein 1e-36 42
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator BAC0083 Protein 5e-37 42
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator AE000516.2.gene3505. Protein 5e-37 42
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator BAC0111 Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator VFG1390 Protein 6e-47 46
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator VFG1389 Protein 5e-37 43
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator VFG0596 Protein 4e-34 42
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator VFG1563 Protein 1e-35 42
M493_11090 REF_PRJNA208285:M493 PhoB family transcriptional regulator VFG1702 Protein 6e-36 41