Gene Information

Name : M493_10150 (M493_10150)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Virulence
Product : C4-dicarboxylate ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1912141 - 1913424 bp
Length : 1284 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GCGCTCGGGGCCATTTTGATCCCGATGATGGTCAAAGCCGGATATGACCGCAACCGTTCGACCGGCCTCATTGCCGCGAG
CGGCATTATTGCCCCGATCATTCCGCCGAGCATCCCGATGATTCTGTTTGGGGTCACAAGCGGCGTATCGATCACGAAGC
TGTTTATGGCCGGCATCGTCCCAGGGATTTTGCTTGGAATTGTTCTGGCAATCTGTTGGTGGTTGGTCGTCCGGAACGAT
TCCGTTGAGGTACTTCCGCGCCAATCGGCGAAAGACATTTGGCGGGCGACCCGTCGGGCCGTTTGGGCGCTTTTATTGCC
AGTTATTATCGTCGGTGGGCTTCGCGGCGGGGTGTTTACGCCGACAGAAGCTGCCGTTGTAGCTGCGTTTTATGCCCTGT
TTGTCGGTTTGTTCATTTATCGTGAACTGAAAGTGAAAGATTTGTTCCACGTGTTCGTGGCAGCGTCGAAAACAACAAGC
GTCGTCATGTTTTTGGTGGCGGCGGCCATGGTGTCGGCCTGGCTCATTACGGTTGCCAATATTCCGTCGATTATGACAGA
TTGGCTAGCGCCGTTCATGGATAATCCATTGGTGCTGTTGTTAGCCATTAATGCGTTGGTGCTGTTGGTCGGAACAGCGA
TGGACTTGACGCCGACGGTGCTCATTTTGACACCGGTGTTGATGCCGATTATTGAAAAAGCGGGAATTGATCCGGTGTAC
TTCGGGGTACTGTTTATTTTAAACAACTGCATCGGGCTGCTCACACCGCCGGTCGGAACGGTGTTAAACGTTGCTTGCGG
GGTAGGGAAAATCGGGATGGAAGACATTATGAAAGGGATTTGGCCGTTTTTGTTGGCGGAAGTGTTAGTGCTGTTGTTGT
TGATTTTCTTCCCGTCCCTTGTCACCGTGCCGCTCGGATGGTTTACAGGAAATTGATAAATATCCTTAACATTAAGGGGG
TTGCGAGGACTATGAAAAAAAGAAATGTGATTAGAAAGATCATGACCGGCTGTATAGCTATGGGCTTGCTTTTCTTGACC
GCGTGCAGTTCAGGAACGACTCAAGGGGGGAATACCGCTAAGACTGAATCGAAAGGAGTTCAACCGCGAGTGATTAAAGC
GGGAATTGGCCTGAACGAAGACCATCCACAAGGCCAAGGATTGCTCAAGTTCAAAGAGATTGTTGAGGAAAAAAGCGGCG
GCAAAATGAAAGTTCAAACGTACTTCAGTGCTACTTTAGGTGACGACTTAAAGATGACAGAAGCGCTTCAGGCCGGAACA
CAAG

Protein sequence :
MALVVFVGSLLGVMALGMPIAFALLVSGVALMLYLDIFDTQIIAQNLISGADNFSLMAIPFFILAGELMNAGGISKRIID
FALSLVGHIRGGLGYVAIIASILFAGLSGSAVADTAALGAILIPMMVKAGYDRNRSTGLIAASGIIAPIIPPSIPMILFG
VTSGVSITKLFMAGIVPGILLGIVLAICWWLVVRNDSVEVLPRQSAKDIWRATRRAVWALLLPVIIVGGLRGGVFTPTEA
AVVAAFYALFVGLFIYRELKVKDLFHVFVAASKTTSVVMFLVAAAMVSAWLITVANIPSIMTDWLAPFMDNPLVLLLAIN
ALVLLVGTAMDLTPTVLILTPVLMPIIEKAGIDPVYFGVLFILNNCIGLLTPPVGTVLNVACGVGKIGMEDIMKGIWPFL
LAEVLVLLLLIFFPSLVTVPLGWFTGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-49 43
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 2e-49 43
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 2e-49 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M493_10150 REF_PRJNA208285:M493 C4-dicarboxylate ABC transporter permease VFG1110 Protein 1e-49 43