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Name : sgbE (M493_09855) Accession : REF_PRJNA208285:M493 Strain : Geobacillus sp. JF8 Genome accession: NC_022080 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : - COG ID : - EC number : 5.1.3.4 Position : 1849462 - 1850148 bp Length : 687 bp Strand : - Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : CACGCGGACTATTTTTATGGGGAAATTCCGTGCACCCGCCCGATGACCAATGAAGAAATTCAAGGGGCTTATGAACTAGA GACCGGAAAGGTGATTACGGAAACGTTCCGTTTCCTTGATCCGCTGCAAATGCCTGGCGTTTTAGTACATGGGCATGGAC CGTTTGCTTGGGGGAAAGATCCAGCAAACGCTGTTCATAATGCTGTTGTTTTGGAAGAAGTGGCAAAAATGGCAGCAAGA ACATTCATGCTCAATCCGAACGTACAGCCGATCAGCCAATCGCTGCTTGACCGCCACTATTTACGCAAGCATGGCGTCAA TGCTTACTATGGGCAATAAGGGGAGGGAGAACTAGATGGGCCAAAAATATGTCATTGGCATCGACTATGGGACGGAATCG GGACGGGCGGTTCTCGTTGATCTAGACGGAAACGAAATTGCGGATCATGTCACTCCATACCCTCACGGAGTTATCGATGA AGTCCTGCCGGAATCGAACGTACAACTCGAGCCAGACTGGGCGTTGCAACACCCGGGTGATTATGTCGAAGTGTTGGCGA CCGCTGTCCCGGCCGTCTTGCAAAAGTCTGGAGTTAGTCCATCGGATGTTATCGGGGTCGGGATCGATTTTACGGCTTGC ACAATGTTGCCGGTTGATGCCTCCGGAGAGCCGCTTTGCTTGAAACC Protein sequence : MLEELKQAVLEANLQLPQYRLVTFTWGNVSGIDRERGLVVIKPSGVAYDKLTVDDMVVVNLDGEVIEGHLKPSSDTPTHV WLYKQFLGIGGIVHTHSTWATTWAQAGKGIPALGTTHADYFYGEIPCTRPMTNEEIQGAYELETGKVITETFRFLDPLQM PGVLVHGHGPFAWGKDPANAVHNAVVLEEVAKMAARTFMLNPNVQPISQSLLDRHYLRKHGVNAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 1e-62 | 61 |
