Gene Information

Name : M493_07465 (M493_07465)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Virulence
Product : iron siderophore-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1380546 - 1381517 bp
Length : 972 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATCGCCGCCTTGAAACCGGATTTGATCATCGGCAACAAATTGCGCCATGAAAAAATTTACGAGCAACTGAAACAAATTGC
TCCGACTGTGTTTGCCGAAACGCTTCGCGGCAATTGGAAAGACAACTTTATGCTTTATGCAAAAGCGGTCAACCAAGAAG
AGAAAGGAAAGCAAGTCATCGCTGAATACGACAAGCGCATTGAAGACTTAAAAGCGAAACTCGGCGACAAGTTAAACATG
AAAGTCTCGATCGTCCGCTTTATGGCCGGCGACGTCCGCATTTATCATAAAGACTCGTTCTCCGGCGTCATTTTAGACCA
ACTCGGCTTCGCCCGCCCGGAATCGCAAAACGTGAACGACTTTGCGGAAACCGGCGTGACGAAAGAACGCATCCCGGCCA
TGGACGGCGACATCTTGTTCTACTTTACATATGAAACCGGGGACGGCAAAGCAAGCGAACTTGAGAAAGAATGGATCAAC
GACCCGCTCTTCCAAAACTTAAACGTCGCGAAACAAGGCAAAGTGTACAAAGTGAGCGACACGATTTGGAACACGGCTGG
CGGTGTGCTCGCAGCCCACTTGATGTTGGATGATATTGAAAAATATTTTCTGCAAGAACAATAATGCCAAAAATGAAGCT
GTACAAAACGGAGCGTTACACACGCTCCGCTGTACAGCTTTTTTGTTGACTTTTGCGCCATCCTCCCCATTATTTTAAAG
CATTGGGGATCCATAGCACCATTTGCGGCCAATATGTGATCACAAAGACTAGGCATTTTCCCTTAACCGTTCTTTATTGC
CAACAACTTCACTACTGCTATAGTACGCCCGTTTGGCCGGCACGATTGCCAGCGCAGTGGCCGCAACAATTCCCGGGATG
GCGAAAGCAAGAAAATTCATCGGGGTAGGAAGCGCCATCGACAGCAGCCATCCGCCAACCATCGGCCCAAACATTCCGCC
AAACCGCCCCAT

Protein sequence :
MKLKHLTLLSAFILSLLLLAGCGGKQEETAEPAEDKEPKAEESYTVEHAMGTTEIKGTPKRVVILTNEGTEALLALGVKP
VGAVKSWTGDPWYDHIKDQMDGVKELGLESEPNVEAIAALKPDLIIGNKLRHEKIYEQLKQIAPTVFAETLRGNWKDNFM
LYAKAVNQEEKGKQVIAEYDKRIEDLKAKLGDKLNMKVSIVRFMAGDVRIYHKDSFSGVILDQLGFARPESQNVNDFAET
GVTKERIPAMDGDILFYFTYETGDGKASELEKEWINDPLFQNLNVAKQGKVYKVSDTIWNTAGGVLAAHLMLDDIEKYFL
QEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 6e-44 41
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 1e-43 41
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 1e-43 41
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 1e-43 41