Gene Information

Name : I871_04425 (I871_04425)
Accession : YP_008415972.1
Strain : Borrelia miyamotoi LB-2001
Genome accession: NC_022079
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.3.3
Position : 903797 - 904801 bp
Length : 1005 bp
Strand : +
Note : catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
TTGAATGGGGGGAAAATATTTATGTGTGATTTACGAAATAGAGATTTTTTAAGGCTTTTGGATTTTACTCAAAAAGATAT
TAGGTATTTACTTGATTTGTCTCATAAATTAAAGAAATCTAAGCATTCAGGAGTTGAAGAACAAAGACTTAAGGGGAAAA
ATATAGCTATGATTTTTGAGAAGGATTCAACAAGAACAAGGTGTGCATTTGAGGTAGCTGCTTATGATCAAGGAGCGAAT
GCTACTTATCTGGGACCAACAGGTAATCAAATAGGTAAGAAGGAGTCTATCATTGATACGGCAAGAGTACTAGAAAGAAT
ATATGATGCTATTGAATTTAGAGGATTTTCTCAAAAAGCAGTTGAGGATTTAGCTAGATATTCTAATGTTCCAGTTTATA
ATGGATTAACAGATATTGCTCACCCAACACAGGTACTTGCTGATTTTATGACTATTGAGGAACATAAGGGGTGTTTGAGC
AATTTGAAGCTGGTTTTTTGTGGTGATGGTAGAAATAATGTTGCCAATTCTTTAATGGAAGGATGTTCTATTATGGGAAT
GGATTTTAGAATATTTGCCCCAAGAGAACTTTTTCCCGATCCAGAATTGGTAGCAAGGGCAAGATTGATAGCAGATGAAA
GTGGAGGTAGTATTGTTATTTCTACTTCTCTTGAGGAAACAGTTAGAGATGCTGATGTTATTTATACTGATGTTTGGGTA
TCTATGGGAGAAACTAATTGGAATGAAAAAATAAAGCTTTTAAGGCCGTATCAAGTTAATAGTAAATTAATGAAATTAGC
AAAAGAAGATGCTATATTTATGCATTGTTTACCCGCTTTTCATAATTTAAGTACATTGCTTGGTAAGAAAATATTTGATA
AGTATGGACTTGATAGTATTGAGGTTACAGATGATGTTTTTGAAAATGCTCGTTCTGTTGTATTTGATGAAGCTGAGAAT
AGGTTGCATACTATTAAGGCTATCATGGTCGGGACTTTGGGATAA

Protein sequence :
MNGGKIFMCDLRNRDFLRLLDFTQKDIRYLLDLSHKLKKSKHSGVEEQRLKGKNIAMIFEKDSTRTRCAFEVAAYDQGAN
ATYLGPTGNQIGKKESIIDTARVLERIYDAIEFRGFSQKAVEDLARYSNVPVYNGLTDIAHPTQVLADFMTIEEHKGCLS
NLKLVFCGDGRNNVANSLMEGCSIMGMDFRIFAPRELFPDPELVARARLIADESGGSIVISTSLEETVRDADVIYTDVWV
SMGETNWNEKIKLLRPYQVNSKLMKLAKEDAIFMHCLPAFHNLSTLLGKKIFDKYGLDSIEVTDDVFENARSVVFDEAEN
RLHTIKAIMVGTLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-85 62
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-85 62
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-85 62
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-85 62
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-85 62
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-85 62
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 2e-87 61