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Name : fliI (I871_01535) Accession : YP_008415451.1 Strain : Borrelia miyamotoi LB-2001 Genome accession: NC_022079 Putative virulence/resistance : Virulence Product : ATP synthase Function : - COG functional category : - COG ID : - EC number : - Position : 299112 - 300419 bp Length : 1308 bp Strand : - Note : involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGACAACTTTTTTGAAAGTTATTCAAAAATATTGGATAGTGTTGAGTCTATGCCTCTTATTGGCAAAGTAAGAAAAAT TAAGGGACTTTTAGTTGAAAGTTTGGGGCCAAAATGTGGTATTGGTGATTTGTGTTTAATTGAACACAGAAGTGGTAAAA GAATATATGCGGAAGTTTTAGGTTTGAATGGACCTTTTATTAGTCTTATGGCTTATGAAAAATTTGATGGAATTGAGGTT GGTGATCAAGTTTATTCCTTGGATAAAAAGCTTCAAATTAATCTTAGTGATGAATTACTTGGAAGGGTAATTGATTCTCT TGGTAGGCCTATTGATAGTAAGGGCCAATTCCTTAGCAATCATTATAAGGAGTTAAGTTTTATTAATATTAATCCTTTAA AAAGGGGTATTTTTTCTGAGCAAATAGTTACTGGCATTAAAGTTCTTGATAGTTTTTTGCCAGTTGCAAAGGGTCAACGT GTAGGTATTTTTTCAGGTGCTGGTGTTGGTAAATCTACTTTACTTGGTATGATTGCTAAAAATTCTAAAGCGGATGTTAA TGTTATTGCATTCATTGGTGAGAGAGGACGTGAGCTTAATGAGTTTATTAAGTATGATCTTGAAGGAGAATGTTTTAATA GGAGTGTTTTGATTGTTTCGACTTCTGATGAAGCTCCTATTTCAAGGTATAAAGGTGCTTATACGGCAACATTAATAGCT GAGTATTTCAGAGATCGTGGGATGGATGTTATGTTGTTGTTTGATTCAATTACAAGATTTGCAAATGCTAAAAGGGAGAT TAGCCTTTCTATGGGAGAGCCACCTGCTACTAAAGGATACCCTCCTTCTGTTTTTGTAGAAATTCCTATTTTGCTTGAGC GTTCGGGACTTAGTGATAAGGGCAGTATTACAGGTTTTTATACTGTTCTTGTTGAGGGTGATGATTTTACAGAACCAATA GCTGATATTATGAAAGCTACTTTGGATGGACATATTATTTTGGATAGAGATTTGTCTGAGAGAGGGATTTATCCTTCGGT AAATATTTTAAGTTCGACTTCCAGGTCTTTTCATAGAATAGTAAATTTTGAGAGACAGAAATTAATATCTCAAATTAGAA ATTTGTTGTCGATTTATAAAAATTATGAAGATTTAATTAAGACGGGAATTTATCTGAAAGGTTCTAATAAGGAAGTTGAT TTAGCAATTTTAAAGTATCCAAAGATTATTGATTTTTTATCCCAAGGAATGCAAGAAGAATTTGATTTTAAAGATTTAGA TAGTGAAATTAGAGAAATATTAGCTTGA Protein sequence : MDNFFESYSKILDSVESMPLIGKVRKIKGLLVESLGPKCGIGDLCLIEHRSGKRIYAEVLGLNGPFISLMAYEKFDGIEV GDQVYSLDKKLQINLSDELLGRVIDSLGRPIDSKGQFLSNHYKELSFININPLKRGIFSEQIVTGIKVLDSFLPVAKGQR VGIFSGAGVGKSTLLGMIAKNSKADVNVIAFIGERGRELNEFIKYDLEGECFNRSVLIVSTSDEAPISRYKGAYTATLIA EYFRDRGMDVMLLFDSITRFANAKREISLSMGEPPATKGYPPSVFVEIPILLERSGLSDKGSITGFYTVLVEGDDFTEPI ADIMKATLDGHIILDRDLSERGIYPSVNILSSTSRSFHRIVNFERQKLISQIRNLLSIYKNYEDLIKTGIYLKGSNKEVD LAILKYPKIIDFLSQGMQEEFDFKDLDSEIREILA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 2e-80 | 44 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 2e-80 | 43 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-80 | 43 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 7e-81 | 43 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-80 | 43 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 3e-81 | 43 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 8e-76 | 43 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-82 | 43 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 2e-67 | 42 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 7e-84 | 42 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 7e-84 | 42 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-83 | 42 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-83 | 42 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-83 | 42 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-83 | 42 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 7e-83 | 42 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-83 | 42 |
| unnamed | AAL06369.1 | EscN | Virulence | LEE | Protein | 8e-70 | 42 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 4e-64 | 41 |
| escN | AFO66300.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 7e-69 | 41 |
| escN | AFO66415.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 7e-69 | 41 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 5e-66 | 41 |
| escN | YP_003223475.1 | translocator EscN | Virulence | LEE | Protein | 6e-70 | 41 |
| escN | CAI43874.1 | EscN protein | Virulence | LEE | Protein | 5e-70 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_008415451.1 | ATP synthase | VFG2144 | Protein | 1e-88 | 44 |
| fliI | YP_008415451.1 | ATP synthase | VFG2331 | Protein | 7e-72 | 44 |
| fliI | YP_008415451.1 | ATP synthase | VFG2499 | Protein | 3e-76 | 44 |
| fliI | YP_008415451.1 | ATP synthase | VFG0515 | Protein | 4e-81 | 43 |
| fliI | YP_008415451.1 | ATP synthase | VFG0390 | Protein | 2e-79 | 43 |
| fliI | YP_008415451.1 | ATP synthase | VFG1254 | Protein | 2e-82 | 42 |
| fliI | YP_008415451.1 | ATP synthase | VFG0048 | Protein | 9e-79 | 42 |
