Gene Information

Name : I871_01460 (I871_01460)
Accession : YP_008415436.1
Strain : Borrelia miyamotoi LB-2001
Genome accession: NC_022079
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 289607 - 289870 bp
Length : 264 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGACAACGGGTCAAATCATTTATCTCATTAGGATTTCTATTGAAAATATTATTATTCTATCAGCTCCAATGTTAATTAC
AGCGCTTATAGTTGGTCTTTTGGTTTCAATTTTTCAGGCTATTACGTCGATTCAGGATCAAACACTTAGTTTTGTTCCTA
AAATTATTATAATACTTTTAACTCTTGTTCTATTTGGTCCTTGGATTTTAAAAAAGCTTATGCAATTTGCTTTTGTACTT
TTTAGTCAAATACAAAATATATAA

Protein sequence : 
MTTGQIIYLIRISIENIIILSAPMLITALIVGLLVSIFQAITSIQDQTLSFVPKIIIILLTLVLFGPWILKKLMQFAFVL
FSQIQNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 2e-08 48
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 2e-08 48
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 2e-08 48
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 5e-08 47
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 9e-07 46
hrcS AAT96147.1 HrcS Virulence T-PAI Protein 2e-05 44
hrcS AAT96201.1 HrcS Virulence T-PAI Protein 2e-05 44
escS AAK26701.1 EscS Virulence LEE Protein 9e-06 42
escS AAL57528.1 EscS Virulence LEE Protein 9e-06 42
escS CAC81848.1 EscS protein Virulence LEE II Protein 9e-06 42
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 1e-05 42
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 1e-05 42
hrcS NP_791221.1 type III secretion protein HrcS Virulence Hrp PAI Protein 5e-05 42
hrcS AAG33885.1 HrcS Virulence Hrp PAI Protein 3e-05 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I871_01460 YP_008415436.1 flagellar biosynthesis protein FliQ VFG0395 Protein 2e-05 44