Gene Information

Name : N559_5153 (N559_5153)
Accession : YP_008414934.1
Strain :
Genome accession: NC_022078
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 23752 - 24138 bp
Length : 387 bp
Strand : -
Note : -

DNA sequence :
GTGTCAGATATGCAGAAAAATATGACTCCCGGCAGGCGTAAAGGCTGCCCTAATTATTCTCCTGAGTTTAAACAGCAACT
CGTTGCTGCCTCCTGCGAACCCGGGATATCCATCTCAAAACTGGCGCTTGAAAATGGCATTAATGCCAATCTGCTCTTTA
AATGGCGCCAGCAGTGGCGCGAGGGAAAGCTGCTATTACCTTCCTCTGAGAGTCCTCAGTTACTTCCTGTGACTCTCGAT
GCCACCGCCGTACAACCAGAACCGCCCGCTGAGGACTCAGAGCTCAGCATCTGCTGTGAGGTAACGTTCCGGCACGGGAC
ACTCCGCCTCAACGGCACTGTCAGCGAAAAGCTTCTGACTCTGCTGATACAGGAACTGAAGCGATGA

Protein sequence :
MSDMQKNMTPGRRKGCPNYSPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLD
ATAVQPEPPAEDSELSICCEVTFRHGTLRLNGTVSEKLLTLLIQELKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL99257.1 unknown Not tested LEE Protein 2e-41 92
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 2e-41 92
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 3e-41 91
unnamed AAC31492.1 L0013 Not tested LEE Protein 2e-42 91
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-42 91
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 4e-42 91
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 4e-42 91
unnamed AAL08462.1 unknown Not tested SRL Protein 1e-41 90
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 1e-24 53
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-24 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_5153 YP_008414934.1 transposase VFG1518 Protein 1e-41 91
N559_5153 YP_008414934.1 transposase VFG1708 Protein 1e-42 91
N559_5153 YP_008414934.1 transposase VFG0791 Protein 1e-42 91
N559_5153 YP_008414934.1 transposase VFG1053 Protein 5e-42 90
N559_5153 YP_008414934.1 transposase VFG1697 Protein 4e-25 53