Gene Information

Name : N559_5305 (N559_5305)
Accession : YP_008415086.1
Strain :
Genome accession: NC_022078
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 217015 - 217896 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence :
ATGGATAGCGCACGCGCCCTTGTTGCCAAAGGACGGGGAATAGCCCTGGTCAGCCGCACCATGGGCGTGTCGCGTGCGCA
GCTGTCACTGCGGATTAACCGTTCTGCCGACTGGCAGGACAAGCGCTGTAACCGGCGTAATGACGAAGCAGACGAAGAAA
TACTGTCGGCTATCCTCGACATCATCAGCGATATGCCGAGTTATGGTTATCGACGCGTGTGGGGCATCCTGCGCAAGCAA
CGTCGCACAGAGGGACAGCCACCTGTGAACGCCAAACGGCTCTACAGGATAATGAGCGAGCATAACCTGTTGTTGTTGCA
TGACAAACCAGAGCGACCGAAGCGTGAACATAAGGGCAAGATAGCGGTGGCAGAAAGCGATATGCGCTGGTGTTCAGATG
GCTTCGAGTTCGGCTGCGACAACGGCGAAAAACTGCGGGTAACGTTCGCGCTGGACTGCTGCGACCGTGAGGCCATAGAC
TGGGCAGCAAGCACGGGAGGCTATGACAGTTCAACCGTGCAGGATGTGATGCTGAGGTCGGTGGAAAAGCGCTTCGGCGA
CAGGTTGCCCGATACAGCGGTGCAGTGGCTGACGGACAACGGTTCAGCGTATACCGCGTATGAAACGTGGAGGTTCGCGA
GAGAGCTGAATCTGGAGCCCTGCACAACAGCGGTGAGCAGCCCGCAGAGTAATGGCATGGCCGAACGGTTCGTGAAAACG
ATGAAAGAAGACTATATCGCGTTCATGCCAAAACCGGATGTGAGAACAGCACTGCGAAACCTTGCAGTAGCGTTCACGCA
TTACAATGAAAACCACCCGCACAGCGCGCTGGGATATCACTCCCCGAGGGAATACCGGCGGCAGCGGACATCGTTAACTT
AA

Protein sequence :
MDSARALVAKGRGIALVSRTMGVSRAQLSLRINRSADWQDKRCNRRNDEADEEILSAILDIISDMPSYGYRRVWGILRKQ
RRTEGQPPVNAKRLYRIMSEHNLLLLHDKPERPKREHKGKIAVAESDMRWCSDGFEFGCDNGEKLRVTFALDCCDREAID
WAASTGGYDSSTVQDVMLRSVEKRFGDRLPDTAVQWLTDNGSAYTAYETWRFARELNLEPCTTAVSSPQSNGMAERFVKT
MKEDYIAFMPKPDVRTALRNLAVAFTHYNENHPHSALGYHSPREYRRQRTSLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 9e-109 77
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-81 75
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-81 75
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 2e-75 75
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 1e-90 67
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 5e-75 64
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 1e-85 63
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 2e-74 63
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 2e-74 63
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 2e-74 63
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 3e-84 62
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 4e-85 62
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 4e-85 62
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 4e-85 62
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 2e-85 62
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 9e-75 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_5305 YP_008415086.1 putative transposase VFG1732 Protein 6e-86 63
N559_5305 YP_008415086.1 putative transposase VFG0649 Protein 1e-74 63
N559_5305 YP_008415086.1 putative transposase VFG0608 Protein 2e-85 62
N559_5305 YP_008415086.1 putative transposase VFG0621 Protein 2e-85 62