Gene Information

Name : N559_5275 (N559_5275)
Accession : YP_008415056.1
Strain :
Genome accession: NC_022078
Putative virulence/resistance : Resistance
Product : arsenic efflux pump protein ArsB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 184214 - 185503 bp
Length : 1290 bp
Strand : +
Note : -

DNA sequence : 
ATGTTACTGGCAGGCGCTATTTTTGTCCTGACCATTGTTTTGGTTATCTGGCAACCAAAGGGATTAGGGATCGGCTGGAG
TGCAATGCTGGGCGCGGGACTGGCTCTGATATCTGGCGTTGTGCATGTGGGCGATATTCCGGTGGTGTGGAATATCGTCT
GGAACGCGACGGCGACCTTTATTGCCGTGATTATTATCAGCCTGCTGCTTGATGAGTCCGGCTTTTTCGAATGGGCGGCA
TTGCATGTTTCGCGCTGGGGTAACGGTCGTGGCCGTTTGCTCTTTACGTATATCGTTCTGCTTGGTGCAGCGGTGGCGGC
ACTGTTTGCCAACGATGGTGCGGCACTTATTCTGACGCCGATAGTCATCGCCATGCTGCTGGCATTAGGGTTCAGCAAAG
GCACGACACTGGCATTCGTCATGGCTGCCGGGTTTATTGCCGATACAGCCAGCCTGCCGCTTATCGTGTCCAACCTGGTT
AACATCGTTTCTGCAGACTTCTTTGGACTGGGCTTCACCGAGTATGCGTCGGTAATGGTGCCGGTGGATATTGCAGCCAT
TGTTGCCACGTTGGTTATGCTGCATTTGTTCTTCCGCAAGGATATCCCACCGACTTACGACCTGGCTCTTCTGAAAGCAC
CGGCAAAAGCGATTAAAGATCTGGCAACCTTCAGAACCGGCTGGATAGTTTTAATACTTCTGCTGGTTGGGTTCTTTGTC
CTTGAGCCGCTTGGTATTCCCGTTAGCGCGATTGCGGCTGTTGGAGCTGTGATCCTGTTTGCAGTAGCTAAACGAGGCCA
TGCCATTAAAACTGGCAAAGTGCTGCGCGGTGCGCCATGGCAGATCGTCATCTTCTCATTGGGGATGTACCTGGTGGTCT
ACGGTCTGCGCAACGCCGGGCTAACCGAATACCTTTCAGGTGTGCTGAATGTACTTGCGGATAAAGGACTCTGGGCTGCA
ACGCTGGGTACTGGCTTCCTGACGGCTTTCCTGTCTTCCATCATGAACAACATGCCTACCGTGCTGGTTGGCGCTCTTTC
TATCGATGGAAGCACCGCAACAGGCGTTATCAAAGAAGCGATGATCTACGCCAACGTGATTGGCTGCGATCTGGGACCTA
AAATTACACCTATTGGTAGCCTGGCAACGCTGCTCTGGCTGCATGTCCTTTCACAGAAGAATATGACCATCACCTGGGGA
TACTATTTCCGCACCGGGATCGTCATGACTCTGCCTGTGCTGTTTGTAACGCTGGCAGCGCTGGCGCTACGTCTCTCTTT
CACTTTGTAA

Protein sequence : 
MLLAGAIFVLTIVLVIWQPKGLGIGWSAMLGAGLALISGVVHVGDIPVVWNIVWNATATFIAVIIISLLLDESGFFEWAA
LHVSRWGNGRGRLLFTYIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
NIVSADFFGLGFTEYASVMVPVDIAAIVATLVMLHLFFRKDIPPTYDLALLKAPAKAIKDLATFRTGWIVLILLLVGFFV
LEPLGIPVSAIAAVGAVILFAVAKRGHAIKTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADKGLWAA
TLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTATGVIKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTITWG
YYFRTGIVMTLPVLFVTLAALALRLSFTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-159 95
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-96 60
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-93 59
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 7e-98 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_5275 YP_008415056.1 arsenic efflux pump protein ArsB BAC0578 Protein 6e-167 100
N559_5275 YP_008415056.1 arsenic efflux pump protein ArsB BAC0576 Protein 1e-163 99
N559_5275 YP_008415056.1 arsenic efflux pump protein ArsB BAC0031 Protein 2e-159 94
N559_5275 YP_008415056.1 arsenic efflux pump protein ArsB BAC0577 Protein 2e-153 91
N559_5275 YP_008415056.1 arsenic efflux pump protein ArsB BAC0575 Protein 2e-98 59
N559_5275 YP_008415056.1 arsenic efflux pump protein ArsB BAC0574 Protein 3e-96 59